myRT

myRT report for GCA_902833445.1_ASM90283344v1

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Seq: CADFFJ010000026.1 TPA_asm: Burkholderia vietnamiensis strain BCC0129 genome assembly, contig: Burkholderia_vietnamiensis_BCC0129_NODE_26_length_107457_cov_11.4474_pilon, whole genome shotgun sequence (107457 bp)
Overview 1 RT 1: 74959-78022 bp Neighborhood of RT #1 [74959, 78108] HTH_MARR RVT-DGRs Avd_like CLECT_VCBS Feature: gene Location: 74959-75309 bp Feature: domain Description: HTH_MARR Location: 74983-75130 bp Feature: domain Description: HTH_MARR Location: 74983-751 30 bp Feature: gene Location: 75306-75920 bp Feature: gene Location: 75931-77259 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76357-77044 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76357-77044 bp Feature: gene Location: 77252-77629 bp Feature: domain Description: Avd_like Location: 77279-77585 bp Feature: domain Description: Avd_like Location: 77279-77585 bp Feature: gene Location: 77644-78108 bp Feature: domain Description: CLECT_VCBS Location: 77851-78022 bp Feature: domain Description: CLECT_VCBS Location: 77851 -78022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MARR (smart00347), RVT-DGRs, Avd_like (cd16376), CLECT_VCBS (cd03603)

Seq: CADFFJ010000035.1 TPA_asm: Burkholderia vietnamiensis strain BCC0129 genome assembly, contig: Burkholderia_vietnamiensis_BCC0129_NODE_35_length_62475_cov_12.2334_pilon, whole genome shotgun sequence (62475 bp)
Overview 1 RT 1: 22717-27856 bp Neighborhood of RT #1 [22717, 27876] LrgB RVT-GII GIIM PRK03767 YhaK Feature: gene Location: 22717-23451 bp Feature: domain Description: LrgB Location: 22792-23428 bp Feature: domain Description: LrgB Location: 2 2 792 -2 342 8 bp Feature: gene Location: 23741-24070 bp Feature: gene Location: 24684-25877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24843-25455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4843-2 5455 bp Feature: domain Description: GIIM Note: maturase Location: 25515-25719 bp Feature: domain Description: GIIM Note: maturase Location: 2 5515-2 5719 bp Feature: gene Location: 26486-27088 bp Feature: domain Description: PRK03767 Location: 26489-27083 bp Feature: domain Description: PRK03767 Location: 2 6489-2 7083 bp Feature: gene Location: 27151-27876 bp Feature: domain Description: YhaK Location: 27154-27856 bp Feature: domain Description: YhaK Location: 2 7154-2 7856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LrgB (pfam04172), RVT-GII, GIIM (pfam08388), PRK03767 (NAD(P)H:quinone oxidoreductase; Provisional), YhaK (COG1741)

Seq: CADFFJ010000061.1 TPA_asm: Burkholderia vietnamiensis strain BCC0129 genome assembly, contig: Burkholderia_vietnamiensis_BCC0129_NODE_61_length_8997_cov_12.0609_pilon, whole genome shotgun sequence (8997 bp)
Overview 1 RT 1: 5374-8830 bp Neighborhood of RT #1 [5374, 8886] Histone_HNS RVT-Retrons DUF3732 Feature: gene Location: 5374-5676 bp Feature: domain Description: Histone_HNS Location: 5398-5656 bp Feature: domain Description: Histone_HNS Location: 53 98-5656 bp Feature: gene Location: 5818-6027 bp Feature: gene Location: 6172-7959 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6349-6991 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 63 49-6991 bp Feature: gene Location: 8092-8886 bp Feature: domain Description: DUF3732 Location: 8278-8830 bp Feature: domain Description: DUF3 73 2 Location: 8278-883 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, DUF3732 (pfam12532)