myRT

myRT report for GCA_902833495.1_ASM90283349v1

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Seq: CADFGB010000013.1 TPA_asm: Burkholderia vietnamiensis strain BCC1170 genome assembly, contig: B_vietnamiensis_BCC1170_ERS785023_SC_contig000013, whole genome shotgun sequence (160333 bp)
Overview 1 RT 1: 42655-48755 bp Neighborhood of RT #1 [42655, 48766] PssA PRK05305 RVT-GII GIIM HNHc PRK05479 ilvH Feature: gene Location: 42655-43527 bp Feature: domain Description: PssA Location: 42793-43471 bp Feature: domain Description: PssA Location: 42793-43471 bp Feature: gene Location: 43543-44187 bp Feature: domain Description: PRK05305 Location: 43567-44179 bp Feature: domain Description: PRK05305 Location: 43567-441 79 bp Feature: gene Location: 44304-45614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44307-44895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44307-44895 bp Feature: domain Description: GIIM Note: maturase Location: 44946-45180 bp Feature: domain Description: GIIM Note: maturase Location: 44946-451 80 bp Feature: domain Description: HNHc Note: nucleases Location: 45411-45564 bp Feature: domain Description: HNHc Note: nucleases Location: 4541 1 -45564 bp Feature: gene Location: 47153-48169 bp Feature: domain Description: PRK05479 Location: 47156-48137 bp Feature: domain Description: PRK05479 Location: 471 56-481 37 bp Feature: gene Location: 48275-48766 bp Feature: domain Description: ilvH Location: 48278-48755 bp Feature: domain Description: ilvH Location: 48278-48755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PssA (COG1183), PRK05305 (phosphatidylserine decarboxylase family protein), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05479 (ketol-acid reductoisomerase; Provisional), ilvH (PRK11895)

Seq: CADFGB010000025.1 TPA_asm: Burkholderia vietnamiensis strain BCC1170 genome assembly, contig: B_vietnamiensis_BCC1170_ERS785023_SC_contig000025, whole genome shotgun sequence (101721 bp)
Overview 1 RT 1: 67071-72804 bp Neighborhood of RT #1 [67071, 72809] LrgB RVT-GII GIIM IS285 PRK03767 Feature: gene Location: 67071-67805 bp Feature: domain Description: LrgB Location: 67146-67782 bp Feature: domain Description: LrgB Location: 67146-67782 bp Feature: gene Location: 68095-68424 bp Feature: gene Location: 69038-70195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69197-69809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69197-69809 bp Feature: domain Description: GIIM Note: maturase Location: 69869-70073 bp Feature: domain Description: GIIM Note: maturase Location: 69869-70073 bp Feature: gene Location: 70201-71481 bp Feature: domain Description: IS285 Location: 70285-71467 bp Feature: domain Description: IS2 85 Location: 702 85-71467 bp Feature: gene Location: 72207-72809 bp Feature: domain Description: PRK03767 Location: 72210-72804 bp Feature: domain Description: PRK03767 Location: 72 2 10-72 804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LrgB (pfam04172), RVT-GII, GIIM (pfam08388), IS285 (COG3328), PRK03767 (NAD(P)H:quinone oxidoreductase; Provisional)

Seq: CADFGB010000032.1 TPA_asm: Burkholderia vietnamiensis strain BCC1170 genome assembly, contig: B_vietnamiensis_BCC1170_ERS785023_SC_contig000032, whole genome shotgun sequence (75508 bp)
Overview 1 RT 1: 73277-75103 bp Neighborhood of RT #1 [73277, 75354] PinE RVT-UG7 Feature: gene Location: 73277-73852 bp Feature: domain Description: PinE Location: 73286-73844 bp Feature: domain Description: PinE Location: 73 286-73 844 bp Feature: gene Location: 74713-75354 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 74725-75103 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 74725-75103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG7

Seq: CADFGB010000068.1 TPA_asm: Burkholderia vietnamiensis strain BCC1170 genome assembly, contig: B_vietnamiensis_BCC1170_ERS785023_SC_contig000068, whole genome shotgun sequence (19515 bp)
Overview 1 RT 1: 5946-9690 bp Neighborhood of RT #1 [5946, 9779] HTH_ARSR RVT-DGRs Avd_like CLECT_VCBS Feature: gene Location: 5946-6296 bp Feature: domain Description: HTH_ARSR Location: 5970-6120 bp Feature: domain Description: HTH_ARSR Location: 5970-6120 bp Feature: gene Location: 6293-7591 bp Feature: gene Location: 7602-8930 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8028-8715 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8028-8715 bp Feature: gene Location: 8923-9300 bp Feature: domain Description: Avd_like Location: 8950-9256 bp Feature: domain Description: Avd_like Location: 8950-9256 bp Feature: gene Location: 9315-9779 bp Feature: domain Description: CLECT_VCBS Location: 9522-9690 bp Feature: domain Description: CLECT_VCBS Location: 9522-9690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-DGRs, Avd_like (cd16376), CLECT_VCBS (cd03603)