myRT

myRT report for GCA_902833535.1_ASM90283353v1

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Seq: CADFFO010000014.1 TPA_asm: Burkholderia vietnamiensis strain BCC1186 genome assembly, contig: B_vietnamiensis_BCC1186_ERS784891_SC_contig000014, whole genome shotgun sequence (160324 bp)
Overview 1 RT 1: 111552-117607 bp Neighborhood of RT #1 [111552, 117663] ilvH PRK05479 RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 111552-112043 bp Feature: domain Description: ilvH Location: 111555-112032 bp Feature: domain Description: ilvH Location: 1 1 1 555-1 1 2032 bp Feature: gene Location: 112149-113165 bp Feature: domain Description: PRK05479 Location: 112152-113133 bp Feature: domain Description: PRK05479 Location: 1 1 21 52-1 1 31 33 bp Feature: gene Location: 114704-116014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114707-115295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 4707-1 1 5295 bp Feature: domain Description: GIIM Note: maturase Location: 115346-115580 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 5346-1 1 5580 bp Feature: domain Description: HNHc Note: nucleases Location: 115811-115964 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 581 1 -1 1 5964 bp Feature: gene Location: 116131-116775 bp Feature: domain Description: PRK05305 Location: 116155-116767 bp Feature: domain Description: PRK05305 Location: 1 1 61 55-1 1 6767 bp Feature: gene Location: 116791-117663 bp Feature: domain Description: PssA Location: 116929-117607 bp Feature: domain Description: PssA Location: 1 1 6929-1 1 7607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)

Seq: CADFFO010000035.1 TPA_asm: Burkholderia vietnamiensis strain BCC1186 genome assembly, contig: B_vietnamiensis_BCC1186_ERS784891_SC_contig000035, whole genome shotgun sequence (75129 bp)
Overview 1 RT 1: 145-2247 bp Neighborhood of RT #1 [145, 2255] RVT-UG7 PinE Feature: gene Location: 145-1233 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 562-982 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 562 -982 bp Feature: gene Location: 1647-2255 bp Feature: domain Description: PinE Location: 1689-2247 bp Feature: domain Description: PinE Location: 1689-2 2 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PinE (COG1961)

Seq: CADFFO010000037.1 TPA_asm: Burkholderia vietnamiensis strain BCC1186 genome assembly, contig: B_vietnamiensis_BCC1186_ERS784891_SC_contig000037, whole genome shotgun sequence (70263 bp)
Overview 1 RT 1: 50-3151 bp Neighborhood of RT #1 [50, 3174] RVT-GII GIIM LrgB Feature: gene Location: 50-1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209-821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209-821 bp Feature: domain Description: GIIM Note: maturase Location: 881-1085 bp Feature: domain Description: GIIM Note: maturase Location: 881-1085 bp Feature: gene Location: 1821-2360 bp Feature: gene Location: 2440-3174 bp Feature: domain Description: LrgB Location: 2515-3151 bp Feature: domain Description: LrgB Location: 2515-3 151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LrgB (pfam04172)

Seq: CADFFO010000075.1 TPA_asm: Burkholderia vietnamiensis strain BCC1186 genome assembly, contig: B_vietnamiensis_BCC1186_ERS784891_SC_contig000075, whole genome shotgun sequence (17729 bp)
Overview 1 RT 1: 9731-13388 bp Neighborhood of RT #1 [9731, 13564] CLECT_VCBS Avd_like RVT-DGRs HTH_ARSR Feature: gene Location: 9731-10195 bp Feature: domain Description: CLECT_VCBS Location: 9938-10106 bp Feature: domain Description: CLECT_VCBS Location: 9938-10106 bp Feature: gene Location: 10210-10587 bp Feature: domain Description: Avd_like Location: 10237-10543 bp Feature: domain Description: Avd_like Location: 10237-1054 3 bp Feature: gene Location: 10580-11908 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11006-11693 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11006-11693 bp Feature: gene Location: 11919-13217 bp Feature: gene Location: 13214-13564 bp Feature: domain Description: HTH_ARSR Location: 13238-13388 bp Feature: domain Description: HTH_ARSR Location: 13238-13388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CLECT_VCBS (cd03603), Avd_like (cd16376), RVT-DGRs, HTH_ARSR (smart00418)