myRT

myRT report for GCA_902833625.1_ASM90283362v1

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Seq: CADFFR010000009.1 TPA_asm: Burkholderia vietnamiensis strain BCC1172 genome assembly, contig: B_vietnamiensis_BCC1172_ERS785031_SC_contig000009, whole genome shotgun sequence (205240 bp)
Overview 1 RT 1: 158763-164915 bp Neighborhood of RT #1 [158763, 164971] ilvH PRK05479 RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 158763-159350 bp Feature: domain Description: ilvH Location: 158862-159339 bp Feature: domain Description: ilvH Location: 1 58862-1 59339 bp Feature: gene Location: 159456-160472 bp Feature: domain Description: PRK05479 Location: 159459-160440 bp Feature: domain Description: PRK05479 Location: 1 59459-1 60440 bp Feature: gene Location: 162011-163321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162014-162602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6201 4-1 62602 bp Feature: domain Description: GIIM Note: maturase Location: 162653-162887 bp Feature: domain Description: GIIM Note: maturase Location: 1 62653-1 62887 bp Feature: domain Description: HNHc Note: nucleases Location: 163118-163271 bp Feature: domain Description: HNHc Note: nucleases Location: 1 631 1 8-1 63271 bp Feature: gene Location: 163439-164083 bp Feature: domain Description: PRK05305 Location: 163463-164075 bp Feature: domain Description: PRK05305 Location: 1 63463-1 64075 bp Feature: gene Location: 164099-164971 bp Feature: domain Description: PssA Location: 164237-164915 bp Feature: domain Description: PssA Location: 1 64237-1 6491 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)

Seq: CADFFR010000028.1 TPA_asm: Burkholderia vietnamiensis strain BCC1172 genome assembly, contig: B_vietnamiensis_BCC1172_ERS785031_SC_contig000028, whole genome shotgun sequence (79216 bp)
Overview 1 RT 1: 4934-14031 bp Neighborhood of RT #1 [4934, 14039] PRK00711 RVT-GII GIIM HNHc PRK05297 yhbS Feature: gene Location: 4934-6235 bp Feature: domain Description: PRK00711 Location: 4937-6203 bp Feature: domain Description: PRK00711 Location: 4937-62 03 bp Feature: gene Location: 6311-6499 bp Feature: gene Location: 7987-9285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7990-8578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7990-8578 bp Feature: domain Description: GIIM Note: maturase Location: 8629-8863 bp Feature: domain Description: GIIM Note: maturase Location: 862 9-8863 bp Feature: domain Description: HNHc Note: nucleases Location: 9091-9247 bp Feature: domain Description: HNHc Note: nucleases Location: 9091-92 47 bp Feature: gene Location: 9436-13500 bp Feature: domain Description: PRK05297 Location: 9451-13498 bp Feature: domain Description: PRK052 97 Location: 9451-13498 bp Feature: gene Location: 13500-14039 bp Feature: domain Description: yhbS Location: 13536-14031 bp Feature: domain Description: yhbS Location: 13536-14031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT yhbS (COG3153), PRK00711 (D-amino acid dehydrogenase), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05297 (phosphoribosylformylglycinamidine synthase; Provisional)

Seq: CADFFR010000029.1 TPA_asm: Burkholderia vietnamiensis strain BCC1172 genome assembly, contig: B_vietnamiensis_BCC1172_ERS785031_SC_contig000029, whole genome shotgun sequence (75328 bp)
Overview 1 RT 1: 60834-64676 bp Neighborhood of RT #1 [60834, 64676] Prim_Zn_Ribbon Toprim_3 RVT-GII GIIM Feature: gene Location: 60834-61979 bp Feature: domain Description: Prim_Zn_Ribbon Location: 60942-61044 bp Feature: domain Description: Prim_Zn_Ribbon Location: 60942-61044 bp Feature: domain Description: Toprim_3 Location: 61566-61860 bp Feature: domain Description: Toprim_3 Location: 61566-61860 bp Feature: gene Location: 62077-62298 bp Feature: gene Location: 62730-64109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63075-63690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 075-63 690 bp Feature: domain Description: GIIM Note: maturase Location: 63750-63951 bp Feature: domain Description: GIIM Note: maturase Location: 63 750-63 951 bp Feature: gene Location: 64234-64473 bp Feature: gene Location: 64470-64676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362), RVT-GII, GIIM (pfam08388)

Seq: CADFFR010000032.1 TPA_asm: Burkholderia vietnamiensis strain BCC1172 genome assembly, contig: B_vietnamiensis_BCC1172_ERS785031_SC_contig000032, whole genome shotgun sequence (70264 bp)
Overview 1 RT 1: 92-3229 bp Neighborhood of RT #1 [92, 3252] RVT-GII GIIM LrgB Feature: gene Location: 92-1285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-863 bp Feature: domain Description: GIIM Note: maturase Location: 923-1127 bp Feature: domain Description: GIIM Note: maturase Location: 923-1127 bp Feature: gene Location: 1899-2438 bp Feature: gene Location: 2518-3252 bp Feature: domain Description: LrgB Location: 2593-3229 bp Feature: domain Description: LrgB Location: 2593-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LrgB (pfam04172), RVT-GII, GIIM (pfam08388)

Seq: CADFFR010000045.1 TPA_asm: Burkholderia vietnamiensis strain BCC1172 genome assembly, contig: B_vietnamiensis_BCC1172_ERS785031_SC_contig000045, whole genome shotgun sequence (54704 bp)
Overview 1 RT 1: 4185-8618 bp Neighborhood of RT #1 [4185, 8618] HTH_MARR RVT-DGRs Avd_like Feature: gene Location: 4185-4535 bp Feature: domain Description: HTH_MARR Location: 4209-4356 bp Feature: domain Description: HTH_MARR Location: 4209-435 6 bp Feature: gene Location: 4532-6412 bp Feature: gene Location: 6423-7751 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6849-7536 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6849-75 36 bp Feature: gene Location: 7744-8121 bp Feature: domain Description: Avd_like Location: 7771-8077 bp Feature: domain Description: Avd_like Location: 7771-8077 bp Feature: gene Location: 8136-8618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MARR (smart00347), RVT-DGRs, Avd_like (cd16376)

Seq: CADFFR010000087.1 TPA_asm: Burkholderia vietnamiensis strain BCC1172 genome assembly, contig: B_vietnamiensis_BCC1172_ERS785031_SC_contig000087, whole genome shotgun sequence (9072 bp)
Overview 1 RT 1: 6340-8844 bp Neighborhood of RT #1 [6340, 8844] Histone_HNS RVT-GII Feature: gene Location: 6340-6780 bp Feature: domain Description: Histone_HNS Location: 6502-6757 bp Feature: domain Description: Histone_HNS Location: 6 502-6 757 bp Feature: gene Location: 7048-7899 bp Feature: gene Location: 8031-8756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8442-8724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8442-8724 bp Feature: gene Location: 8539-8844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-GII