myRT

myRT report for GCA_902833655.1_ASM90283365v1

Download annotations/find similar RTs

Seq: CADFGL010000044.1 TPA_asm: Paraburkholderia phenoliruptrix strain LMG 22037 genome assembly, contig: Burkholderia_phenoliruptrix_BCC1611_NODE_44_length_40786_cov_18.2823_pilon, whole genome shotgun sequence (40786 bp)
Overview 1 RT 1: 36004-40642 bp Neighborhood of RT #1 [36004, 40785] Prim_Zn_Ribbon Toprim_3 RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 Feature: gene Location: 36004-37077 bp Feature: domain Description: Prim_Zn_Ribbon Location: 36136-36244 bp Feature: domain Description: Prim_Zn_Ribbon Location: 361 36-36244 bp Feature: domain Description: Toprim_3 Location: 36775-37060 bp Feature: domain Description: Toprim_3 Location: 36775-37060 bp Feature: gene Location: 37272-37439 bp Feature: gene Location: 37528-38904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37873-38488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37873-38488 bp Feature: domain Description: GIIM Note: maturase Location: 38545-38746 bp Feature: domain Description: GIIM Note: maturase Location: 38545-38746 bp Feature: gene Location: 39113-39868 bp Feature: domain Description: IstB_IS21_ATP Location: 39185-39269 bp Feature: domain Description: IstB_IS21 _ATP Location: 391 85-39269 bp Feature: domain Description: IstB_IS21 Location: 39275-39803 bp Feature: domain Description: IstB_IS21 Location: 39275-39803 bp Feature: gene Location: 39883-40785 bp Feature: domain Description: COG4584 Location: 40246-40642 bp Feature: domain Description: COG4584 Location: 40246-40642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase )

Seq: CADFGL010000052.1 TPA_asm: Paraburkholderia phenoliruptrix strain LMG 22037 genome assembly, contig: Burkholderia_phenoliruptrix_BCC1611_NODE_52_length_27385_cov_12.7401_pilon, whole genome shotgun sequence (27385 bp)
Overview 1 RT 1: 2125-5543 bp Neighborhood of RT #1 [2125, 6016] RVT-GII GIIM phage_rel_nuc Feature: gene Location: 2125-2400 bp Feature: gene Location: 2629-2841 bp Feature: gene Location: 2857-4224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3184-3805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3184-3805 bp Feature: domain Description: GIIM Note: maturase Location: 3856-4066 bp Feature: domain Description: GIIM Note: maturase Location: 3856-4066 bp Feature: gene Location: 4542-4898 bp Feature: gene Location: 5063-6016 bp Feature: domain Description: phage_rel_nuc Location: 5081-5543 bp Feature: domain Description: phage_rel_nuc Location: 5081-5543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), phage_rel_nuc (TIGR03033)