myRT

myRT report for GCA_902833695.1_ASM90283369v1

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Seq: CADFGI010000004.1 TPA_asm: Paraburkholderia sp. BCC1876 genome assembly, contig: Burkholderia_bryophila_BCC1876_NODE_4_length_785957_cov_9.87902_pilon, whole genome shotgun sequence (785957 bp)
Overview 1 RT 1: 390191-395981 bp Neighborhood of RT #1 [390191, 395995] YecT YdcF-like RVT-Retrons GlxA GyrI-like 2A0305 Feature: gene Location: 390191-390655 bp Feature: domain Description: YecT Location: 390257-390470 bp Feature: domain Description: YecT Location: 390257-390470 bp Feature: gene Location: 390900-391508 bp Feature: domain Description: YdcF-like Location: 391047-391440 bp Feature: domain Description: YdcF-like Location: 391 047-391 440 bp Feature: gene Location: 391518-392891 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391983-392622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391 983-392622 bp Feature: gene Location: 393476-394348 bp Feature: domain Description: GlxA Location: 393509-393827 bp Feature: domain Description: GlxA Location: 393509-393827 bp Feature: domain Description: GyrI-like Location: 393881-394343 bp Feature: domain Description: GyrI-like Location: 393881 -394343 bp Feature: gene Location: 394592-395995 bp Feature: domain Description: 2A0305 Location: 394637-395981 bp Feature: domain Description: 2A0305 Location: 394637-395981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YecT (COG3755), YdcF-like (cl00630), RVT-Retrons, GlxA (COG4977), GyrI-like (pfam06445), 2A0305 (TIGR00908)

Seq: CADFGI010000013.1 TPA_asm: Paraburkholderia sp. BCC1876 genome assembly, contig: Burkholderia_bryophila_BCC1876_NODE_13_length_217362_cov_10.2424_pilon, whole genome shotgun sequence (217362 bp)
Overview 1 RT 1: 108959-119214 bp Neighborhood of RT #1 [108959, 119214] DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF262 COG3472 RVT-UG12 Peptidase_M78 UvrD UvrD PDDEXK_1 Feature: gene Location: 108959-110629 bp Feature: domain Description: DEXXQc_SF1 Location: 108971-109565 bp Feature: domain Description: DEXXQc_SF1 Location: 108971-109565 bp Feature: domain Description: SF1_C_Upf1 Location: 109571-110081 bp Feature: domain Description: SF1_C_Upf1 Location: 109571-110081 bp Feature: domain Description: MTES_1575 Location: 110174-110453 bp Feature: domain Description: MTES_1575 Location: 110174-110453 bp Feature: gene Location: 110749-112656 bp Feature: domain Description: DUF262 Location: 110791-111526 bp Feature: domain Description: DUF2 62 Location: 110791-11152 6 bp Feature: domain Description: COG3472 Location: 111649-112570 bp Feature: domain Description: COG3472 Location: 111649-112 570 bp Feature: gene Location: 112792-114549 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 113170-113620 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 113170-11362 0 bp Feature: gene Location: 114785-118114 bp Feature: domain Description: Peptidase_M78 Location: 114986-115301 bp Feature: domain Description: Peptidase_M78 Location: 114986-115301 bp Feature: domain Description: UvrD Location: 115373-116615 bp Feature: domain Description: UvrD Location: 115373-116615 bp Feature: domain Description: UvrD Location: 117038-117314 bp Feature: domain Description: UvrD Location: 117038-117314 bp Feature: domain Description: PDDEXK_1 Location: 117479-117554 bp Feature: domain Description: PDDEXK_1 Location: 117479-117554 bp Feature: gene Location: 118123-119214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), DUF262 (pfam03235), COG3472 (Uncharacterized protein ), RVT-UG12, Peptidase_M78 (pfam06114), UvrD (COG0210), PDDEXK_1 (pfam12705)