myRT

myRT report for GCA_902859825.1_LMG_22037

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Seq: CADIKB010000056.1 Paraburkholderia phenoliruptrix strain LMG 22037 genome assembly, contig: 56, whole genome shotgun sequence (27353 bp)
Overview 1 RT 1: 1790-5527 bp Neighborhood of RT #1 [1790, 6000] RVT-GII GIIM phage_rel_nuc Feature: gene Location: 1790-1963 bp Feature: gene Location: 2109-2384 bp Feature: gene Location: 2928-4208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3168-3789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 68-3789 bp Feature: domain Description: GIIM Note: maturase Location: 3840-4050 bp Feature: domain Description: GIIM Note: maturase Location: 3840-4050 bp Feature: gene Location: 4526-4882 bp Feature: gene Location: 5047-6000 bp Feature: domain Description: phage_rel_nuc Location: 5065-5527 bp Feature: domain Description: phage_rel_nuc Location: 5065-5527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), phage_rel_nuc (TIGR03033)

Seq: CADIKB010000048.1 Paraburkholderia phenoliruptrix strain LMG 22037 genome assembly, contig: 48, whole genome shotgun sequence (40644 bp)
Overview 1 RT 1: 33798-40478 bp Neighborhood of RT #1 [33798, 40621] CobT vWA_norD_type Prim_Zn_Ribbon Toprim_3 RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 Feature: gene Location: 33798-35927 bp Feature: domain Description: CobT Location: 33810-34605 bp Feature: domain Description: CobT Location: 33810-34605 bp Feature: domain Description: vWA_norD_type Location: 35394-35883 bp Feature: domain Description: vWA_norD_type Location: 35394-35883 bp Feature: gene Location: 35987-37060 bp Feature: domain Description: Prim_Zn_Ribbon Location: 36119-36227 bp Feature: domain Description: Prim_Zn_Ribbon Location: 36119-362 2 7 bp Feature: domain Description: Toprim_3 Location: 36758-37043 bp Feature: domain Description: Toprim_3 Location: 36758-37043 bp Feature: gene Location: 37523-38887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37856-38471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37856-38471 bp Feature: domain Description: GIIM Note: maturase Location: 38528-38729 bp Feature: domain Description: GIIM Note: maturase Location: 3852 8-3872 9 bp Feature: gene Location: 39096-39851 bp Feature: domain Description: IstB_IS21_ATP Location: 39168-39252 bp Feature: domain Description: IstB_IS2 1_ATP Location: 39168-392 52 bp Feature: domain Description: IstB_IS21 Location: 39258-39786 bp Feature: domain Description: IstB_IS2 1 Location: 392 58-39786 bp Feature: gene Location: 39866-40621 bp Feature: domain Description: COG4584 Location: 40082-40478 bp Feature: domain Description: COG4584 Location: 40082 -40478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CobT (TIGR01651), vWA_norD_type (cd01454), Prim_Zn_Ribbon (smart00778), Toprim_3 (pfam13362), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase )