myRT

myRT report for GCA_902859865.1_LMG_30113

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Seq: CADIKE010000010.1 Burkholderia paludis strain LMG 30113 genome assembly, contig: 10, whole genome shotgun sequence (236868 bp)
Overview 1 RT 1: 99587-104648 bp Neighborhood of RT #1 [99587, 104668] UvrD UvrD pcrA RVT-Retrons HTH_37 COG4679 Feature: gene Location: 99587-101332 bp Feature: domain Description: UvrD Location: 99596-99872 bp Feature: domain Description: UvrD Location: 99596-99872 bp Feature: domain Description: UvrD Location: 100112-100502 bp Feature: domain Description: UvrD Location: 1 001 1 2-1 00502 bp Feature: domain Description: pcrA Location: 101069-101234 bp Feature: domain Description: pcrA Location: 1 01 069-1 01 234 bp Feature: gene Location: 101420-102829 bp Feature: gene Location: 102830-103972 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103055-103694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 03055-1 03694 bp Feature: gene Location: 103986-104306 bp Feature: domain Description: HTH_37 Location: 104031-104262 bp Feature: domain Description: HTH_37 Location: 1 04031 -1 04262 bp Feature: gene Location: 104306-104668 bp Feature: domain Description: COG4679 Location: 104321-104648 bp Feature: domain Description: COG4679 Location: 1 04321 -1 04648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_37 (pfam13744), COG4679 (Phage-related protein ), UvrD (COG0210), pcrA (TIGR01073)

Seq: CADIKE010000031.1 Burkholderia paludis strain LMG 30113 genome assembly, contig: 31, whole genome shotgun sequence (91858 bp)
Overview 1 RT 1: 20540-26116 bp Neighborhood of RT #1 [20540, 26139] M14_ASTE_ASPA-like FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 20540-21523 bp Feature: domain Description: M14_ASTE_ASPA-like Location: 20606-21227 bp Feature: domain Description: M14_ASTE_ASPA-like Location: 2 0606-2 12 2 7 bp Feature: gene Location: 21776-22393 bp Feature: domain Description: FIN Location: 21956-22310 bp Feature: domain Description: FIN Location: 2 1956-2 2 310 bp Feature: gene Location: 22604-23953 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23069-23705 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3069-2 3705 bp Feature: gene Location: 24283-24612 bp Feature: domain Description: Histone_HNS Location: 24304-24541 bp Feature: domain Description: Histone_HNS Location: 2 4304-2 4541 bp Feature: gene Location: 24892-26139 bp Feature: domain Description: MFS_MucK Location: 24982-26116 bp Feature: domain Description: MFS_MucK Location: 2 4982 -2 6116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M14_ASTE_ASPA-like (cd06910), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)