myRT

myRT report for GCA_902876715.1_H120

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Seq: CADILR010000068.1 Escherichia coli H120 genome assembly, contig: contig_68, whole genome shotgun sequence (197044 bp)
Overview 1 RT 1: 75217-79980 bp Neighborhood of RT #1 [75217, 80072] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 75217-76395 bp Feature: domain Description: PRK09692 Location: 75226-76378 bp Feature: domain Description: PRK09692 Location: 75226-76378 bp Feature: gene Location: 76412-77149 bp Feature: domain Description: SLATT_5 Location: 76511-77117 bp Feature: domain Description: SLATT_5 Location: 7651 1 -771 1 7 bp Feature: gene Location: 77248-78657 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 77485-78097 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 77485-78097 bp Feature: gene Location: 78980-79552 bp Feature: domain Description: Psu Location: 78998-79535 bp Feature: domain Description: Psu Location: 78998-79535 bp Feature: gene Location: 79626-80072 bp Feature: domain Description: PRK09678 Location: 79635-79707 bp Feature: domain Description: PRK09678 Location: 79635-79707 bp Feature: domain Description: PRK09678 Location: 79830-79980 bp Feature: domain Description: PRK09678 Location: 79830-79980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: CADILR010000080.1 Escherichia coli H120 genome assembly, contig: contig_80, whole genome shotgun sequence (50808 bp)
Overview 1 RT 1: 6501-10224 bp Neighborhood of RT #1 [6501, 10229] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 6501-6707 bp Feature: gene Location: 7041-7250 bp Feature: gene Location: 7385-9286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7652-8483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7652 -8483 bp Feature: domain Description: Intron_maturas2 Location: 8597-8855 bp Feature: domain Description: Intron_maturas2 Location: 8597-8855 bp Feature: domain Description: HNHc Note: nucleases Location: 9029-9191 bp Feature: domain Description: HNHc Note: nucleases Location: 902 9-9191 bp Feature: gene Location: 9481-9933 bp Feature: domain Description: PRK13732 Location: 9487-9931 bp Feature: domain Description: PRK13732 Location: 9487-9931 bp Feature: gene Location: 9996-10229 bp Feature: domain Description: DUF905 Location: 10026-10224 bp Feature: domain Description: DUF905 Location: 1002 6-102 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)