myRT

myRT report for GCA_903166545.1_P9898

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Seq: CAESCH010000001.1 Bacillus sp. Marseille-P9898 genome assembly, contig: contig00001, whole genome shotgun sequence (4279115 bp)
Overview 1 RT 1: 1252376-1256632 bp 2 RT 2: 3306488-3314748 bp 3 RT 3: 3649717-3655878 bp 4 RT 4: 4143391-4148703 bp Neighborhood of RT #1 [1252376, 1256632] Coat_X Coat_X DUF1360 RVT-GII GIIM YcaP Neighborhood of RT #2 [3306488, 3314759] DUF2935 DUF2935 RVT-GII GIIM DUF772 DDE_Tnp_1_3 DDE_Tnp_1_6 RVT-GII GntP_permease RpiR Neighborhood of RT #3 [3649717, 3655878] recU MrcB RVT-GII Neighborhood of RT #4 [4143391, 4148705] PRK03124 PRK07729 RVT-GII coaE spore_YtaF Feature: gene Location: 1252376-1252798 bp Feature: domain Description: Coat_X Location: 1252436-1252601 bp Feature: domain Description: Coat_X Location: 1 252436-1 252601 bp Feature: domain Description: Coat_X Location: 1252622-1252793 bp Feature: domain Description: Coat_X Location: 1 252622-1 252793 bp Feature: gene Location: 1253105-1253455 bp Feature: domain Description: DUF1360 Location: 1253132-1253435 bp Feature: domain Description: DUF1 360 Location: 1 2531 32-1 253435 bp Feature: gene Location: 1254282-1255556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1254483-1255098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 254483-1 255098 bp Feature: domain Description: GIIM Note: maturase Location: 1255158-1255371 bp Feature: domain Description: GIIM Note: maturase Location: 1 2551 58-1 255371 bp Feature: gene Location: 1255720-1256412 bp Feature: domain Description: YcaP Location: 1255729-1256398 bp Feature: domain Description: YcaP Location: 1 255729-1 256398 bp Feature: gene Location: 1256429-1256632 bp Feature: gene Location: 3306488-3306967 bp Feature: gene Location: 3307126-3307956 bp Feature: domain Description: DUF2935 Location: 3307153-3307492 bp Feature: domain Description: DUF2935 Location: 33071 53-3307492 bp Feature: domain Description: DUF2935 Location: 3307549-3307885 bp Feature: domain Description: DUF2935 Location: 3307549-3307885 bp Feature: gene Location: 3308333-3308959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3308348-3308579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3308348-3308579 bp Feature: domain Description: GIIM Note: maturase Location: 3308669-3308873 bp Feature: domain Description: GIIM Note: maturase Location: 3308669-3308873 bp Feature: gene Location: 3309176-3310714 bp Feature: domain Description: DUF772 Location: 3309335-3309557 bp Feature: domain Description: DUF772 Location: 3309335-3309557 bp Feature: domain Description: DDE_Tnp_1_3 Location: 3309944-3310202 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 3309944-331 0202 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3310295-3310655 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 331 0295-331 0655 bp Feature: gene Location: 3310737-3311429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3310992-3311376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 0992-331 1 376 bp Feature: gene Location: 3312109-3313452 bp Feature: domain Description: GntP_permease Location: 3312124-3313435 bp Feature: domain Description: GntP_permease Location: 331 21 24-331 3435 bp Feature: gene Location: 3313905-3314759 bp Feature: domain Description: RpiR Location: 3313932-3314748 bp Feature: domain Description: RpiR Location: 331 3932-331 4748 bp Feature: gene Location: 3649717-3650310 bp Feature: domain Description: recU Location: 3649726-3650305 bp Feature: domain Description: recU Location: 3649726-3650305 bp Feature: gene Location: 3650366-3653083 bp Feature: domain Description: MrcB Location: 3650429-3652838 bp Feature: domain Description: MrcB Location: 3650429-3652838 bp Feature: gene Location: 3653228-3654664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3653456-3654080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3653456-3654080 bp Feature: gene Location: 3655199-3655333 bp Feature: gene Location: 3655339-3655878 bp Feature: gene Location: 4143391-4143777 bp Feature: domain Description: PRK03124 Location: 4143400-4143769 bp Feature: domain Description: PRK031 24 Location: 41 43400-41 43769 bp Feature: gene Location: 4144053-4145072 bp Feature: domain Description: PRK07729 Location: 4144059-4145058 bp Feature: domain Description: PRK07729 Location: 41 44059-41 45058 bp Feature: gene Location: 4145343-4146779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4145571-4146195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 45571 -41 461 95 bp Feature: gene Location: 4147454-4148047 bp Feature: domain Description: coaE Location: 4147457-4148039 bp Feature: domain Description: coaE Location: 41 47457-41 48039 bp Feature: gene Location: 4148067-4148705 bp Feature: domain Description: spore_YtaF Location: 4148085-4148703 bp Feature: domain Description: spore_YtaF Location: 41 48085-41 48703 bp Sorry, your browser does not 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Associated domains:myRT Coat_X (pfam07552), DUF1360 (pfam07098), RVT-GII, GIIM (pfam08388), YcaP (COG2323), DUF2935 (pfam11155), DUF772 (pfam05598), DDE_Tnp_1_3 (pfam13612), DDE_Tnp_1_6 (pfam13751), GntP_permease (pfam02447)
RpiR (COG1737), recU (TIGR00648), MrcB (COG0744), PRK03124 (S-adenosylmethionine decarboxylase proenzyme; Provisional), PRK07729 (glyceraldehyde-3-phosphate dehydrogenase; Validated), coaE (PRK14734), spore_YtaF (TIGR02840)

Seq: CAESCH010000002.1 Bacillus sp. Marseille-P9898 genome assembly, contig: contig00002, whole genome shotgun sequence (960258 bp)
Overview 1 RT 1: 551877-556970 bp 2 RT 2: 778367-783086 bp Neighborhood of RT #1 [551877, 556984] PhnE PhnE RVT-GII PhnG_redo PhnH Neighborhood of RT #2 [778367, 783091] CspC RVT-GII prsA PRK13028 Feature: gene Location: 551877-552662 bp Feature: domain Description: PhnE Location: 551907-552657 bp Feature: domain Description: PhnE Location: 551907-552 657 bp Feature: gene Location: 552662-553507 bp Feature: domain Description: PhnE Location: 552746-553493 bp Feature: domain Description: PhnE Location: 552 746-553493 bp Feature: gene Location: 554183-555619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554411-555035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 554411-555035 bp Feature: gene Location: 555928-556371 bp Feature: domain Description: PhnG_redo Location: 555940-556351 bp Feature: domain Description: PhnG_redo Location: 555940-556351 bp Feature: gene Location: 556358-556984 bp Feature: domain Description: PhnH Location: 556388-556970 bp Feature: domain Description: PhnH Location: 556388-556970 bp Feature: gene Location: 778367-778564 bp Feature: domain Description: CspC Location: 778370-778559 bp Feature: domain Description: CspC Location: 778370-778559 bp Feature: gene Location: 778587-778727 bp Feature: gene Location: 779262-780698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779490-780114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779490-780114 bp Feature: gene Location: 780911-781801 bp Feature: domain Description: prsA Location: 781064-781787 bp Feature: domain Description: prsA Location: 781064-781787 bp Feature: gene Location: 781925-783091 bp Feature: domain Description: PRK13028 Location: 781934-783086 bp Feature: domain Description: PRK1302 8 Location: 781934-783086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhnE (TIGR01097), RVT-GII, PhnG_redo (TIGR03293), PhnH (pfam05845), CspC (COG1278), prsA (PRK04405), PRK13028 (tryptophan synthase subunit beta; Provisional)

Seq: CAESCH010000003.1 Bacillus sp. Marseille-P9898 genome assembly, contig: contig00003, whole genome shotgun sequence (260129 bp)
Overview 1 RT 1: 27512-34869 bp Neighborhood of RT #1 [27512, 34869] RVT-GII RVT-GII GIIM RVT-GII GIIM DinG DinG Feature: gene Location: 27512-27763 bp Feature: gene Location: 28065-28250 bp Feature: gene Location: 28306-29001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28507-28981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28507-28981 bp Feature: gene Location: 29524-30786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29728-30385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29728-3 03 85 bp Feature: domain Description: GIIM Note: maturase Location: 30466-30694 bp Feature: domain Description: GIIM Note: maturase Location: 3 0466-3 0694 bp Feature: gene Location: 30883-31446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30889-30988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0889-3 0988 bp Feature: domain Description: GIIM Note: maturase Location: 31048-31258 bp Feature: domain Description: GIIM Note: maturase Location: 3 1048-3 1258 bp Feature: gene Location: 31625-34120 bp Feature: domain Description: DinG Location: 31700-32387 bp Feature: domain Description: DinG Location: 3 1700-3 23 87 bp Feature: domain Description: DinG Location: 32471-33488 bp Feature: domain Description: DinG Location: 3 2471-3 3 488 bp Feature: gene Location: 34453-34869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DinG (COG1199)