myRT

myRT report for GCA_903166565.1_P9899

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Seq: CAESCG010000001.1 Pseudomonas sp. Marseille-P9899 genome assembly, contig: contig00001, whole genome shotgun sequence (2151808 bp)
Overview 1 RT 1: 78466-82160 bp Neighborhood of RT #1 [78466, 82174] Dcm Dcm RVT-DGRs Avd_like DUF1566 Feature: gene Location: 78466-78795 bp Feature: gene Location: 78883-79806 bp Feature: domain Description: Dcm Location: 78889-79474 bp Feature: domain Description: Dcm Location: 78889-79474 bp Feature: domain Description: Dcm Location: 79642-79798 bp Feature: domain Description: Dcm Location: 79642-79798 bp Feature: gene Location: 79820-80815 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79907-80591 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79907-80591 bp Feature: gene Location: 81176-81568 bp Feature: domain Description: Avd_like Location: 81242-81548 bp Feature: domain Description: Avd_like Location: 81 242-81 548 bp Feature: gene Location: 81587-82174 bp Feature: domain Description: DUF1566 Location: 81935-82160 bp Feature: domain Description: DUF1 566 Location: 81 935-821 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: CAESCG010000011.1 Pseudomonas sp. Marseille-P9899 genome assembly, contig: contig00011, whole genome shotgun sequence (219560 bp)
Overview 1 RT 1: 187221-194312 bp Neighborhood of RT #1 [187221, 194312] PRK13981 TPR_12 TPR_12 TPR_12 TPR RVT-Retrons Feature: gene Location: 187221-189002 bp Feature: domain Description: PRK13981 Location: 187365-188991 bp Feature: domain Description: PRK13981 Location: 187365-188991 bp Feature: gene Location: 189345-191030 bp Feature: domain Description: TPR_12 Location: 190122-190323 bp Feature: domain Description: TPR_12 Location: 19012 2 -19032 3 bp Feature: domain Description: TPR_12 Location: 190347-190446 bp Feature: domain Description: TPR_12 Location: 190347-190446 bp Feature: domain Description: TPR_12 Location: 190575-190728 bp Feature: domain Description: TPR_12 Location: 190575-19072 8 bp Feature: domain Description: TPR Location: 190776-190959 bp Feature: domain Description: TPR Location: 190776-190959 bp Feature: gene Location: 191103-192269 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191361-192006 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191361-192 006 bp Feature: gene Location: 192459-193760 bp Feature: gene Location: 194037-194312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13981 (NAD synthetase; Provisional), TPR_12 (pfam13424), TPR (smart00028), RVT-Retrons