myRT

myRT report for GCA_903171875.1_Kp2209

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Seq: CAESWV010000001.1 Klebsiella pneumoniae isolate Kp2209 genome assembly, contig: chr, whole genome shotgun sequence (5369436 bp)
Overview 1 RT 1: 1972727-1977721 bp 2 RT 2: 3979558-3984021 bp Neighborhood of RT #1 [1972727, 1977721] GH43_62_32_68_117_130-like PinE RVT-GII Neighborhood of RT #2 [3979558, 3984050] InsE PHA02517 RVT-GII GIIM PHA02517 COG4941 Feature: gene Location: 1972727-1974358 bp Feature: domain Description: GH43_62_32_68_117_130-like Location: 1973549-1973831 bp Feature: domain Description: GH43_62_32_68_1 1 7_1 30-like Location: 1 973549-1 973831 bp Feature: gene Location: 1974589-1975137 bp Feature: domain Description: PinE Location: 1974592-1975129 bp Feature: domain Description: PinE Location: 1 974592-1 9751 29 bp Feature: gene Location: 1975591-1977078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1975996-1976686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 975996-1 976686 bp Feature: gene Location: 1977156-1977395 bp Feature: gene Location: 1977587-1977721 bp Feature: gene Location: 3979558-3979842 bp Feature: domain Description: InsE Location: 3979573-3979831 bp Feature: domain Description: InsE Location: 3979573-3979831 bp Feature: gene Location: 3979884-3980309 bp Feature: domain Description: PHA02517 Location: 3979905-3980244 bp Feature: domain Description: PHA0251 7 Location: 3979905-3980244 bp Feature: gene Location: 3980901-3982424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3981174-3981906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3981 1 74-3981 906 bp Feature: domain Description: GIIM Note: maturase Location: 3981981-3982179 bp Feature: domain Description: GIIM Note: maturase Location: 3981 981 -39821 79 bp Feature: gene Location: 3982520-3982975 bp Feature: domain Description: PHA02517 Location: 3982529-3982949 bp Feature: domain Description: PHA0251 7 Location: 3982529-3982949 bp Feature: gene Location: 3983499-3984050 bp Feature: domain Description: COG4941 Location: 3983502-3984021 bp Feature: domain Description: COG4941 Location: 3983502-3984021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH43_62_32_68_117_130-like (cd08994), PinE (COG1961), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), COG4941 (Predicted RNA polymerase sigma factor, contains C-terminal TPR domain )

Seq: CAESWV010000002.1 Klebsiella pneumoniae isolate Kp2209 genome assembly, contig: plasmid_1, whole genome shotgun sequence (210389 bp)
Overview 1 RT 1: 154393-157509 bp Neighborhood of RT #1 [154393, 157509] PRK10276 RVT-GII Feature: gene Location: 154393-154818 bp Feature: domain Description: PRK10276 Location: 154396-154804 bp Feature: domain Description: PRK102 76 Location: 154396-154804 bp Feature: gene Location: 155012-155224 bp Feature: gene Location: 155299-156708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155626-156316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15562 6-156316 bp Feature: gene Location: 156942-157172 bp Feature: gene Location: 157231-157509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CAESWV010000003.1 Klebsiella pneumoniae isolate Kp2209 genome assembly, contig: plasmid_2, whole genome shotgun sequence (120874 bp)
Overview 1 RT 1: 97579-101661 bp Neighborhood of RT #1 [97579, 101798] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 97579-98010 bp Feature: domain Description: PRK10276 Location: 97630-97993 bp Feature: domain Description: PRK10276 Location: 9763 0-97993 bp Feature: gene Location: 98208-98420 bp Feature: gene Location: 98495-99904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98822-99512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98822-99512 bp Feature: gene Location: 100153-101124 bp Feature: domain Description: StbA Location: 100156-101101 bp Feature: domain Description: StbA Location: 100156-101101 bp Feature: gene Location: 101127-101798 bp Feature: domain Description: Plasmid_stab_B Location: 101142-101349 bp Feature: domain Description: Plasmid_stab_B Location: 101142-1013 49 bp Feature: domain Description: Plasmid_stab_B Location: 101454-101661 bp Feature: domain Description: Plasmid_stab_B Location: 101454-101661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)