myRT

myRT report for GCA_903171885.1_Kp2958

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Seq: CAESWX010000001.1 Klebsiella pneumoniae isolate Kp2958 genome assembly, contig: chr, whole genome shotgun sequence (5476868 bp)
Overview 1 RT 1: 258069-264937 bp Neighborhood of RT #1 [258069, 264939] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 258069-258797 bp Feature: domain Description: FimC Location: 258117-258780 bp Feature: domain Description: FimC Location: 2581 1 7-258780 bp Feature: gene Location: 258829-261438 bp Feature: domain Description: FimD Location: 258886-261427 bp Feature: domain Description: FimD Location: 258886-261 427 bp Feature: gene Location: 261438-263516 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 261846-262290 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 261 846-262290 bp Feature: gene Location: 263573-264013 bp Feature: domain Description: Integrase_1 Location: 263579-263795 bp Feature: domain Description: Integrase_1 Location: 263579-263795 bp Feature: gene Location: 264274-264939 bp Feature: domain Description: INT_P4_C Location: 264379-264937 bp Feature: domain Description: INT_P4_C Location: 264379-264937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: CAESWX010000003.1 Klebsiella pneumoniae isolate Kp2958 genome assembly, contig: plasmid_2, whole genome shotgun sequence (197001 bp)
Overview 1 RT 1: 95112-98382 bp Neighborhood of RT #1 [95112, 98396] RVT-GII PRK10276 Feature: gene Location: 95112-95327 bp Feature: gene Location: 95594-95824 bp Feature: gene Location: 96058-97569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96463-97177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96463-97177 bp Feature: gene Location: 97620-97853 bp Feature: gene Location: 97971-98396 bp Feature: domain Description: PRK10276 Location: 97974-98382 bp Feature: domain Description: PRK102 76 Location: 97974-98382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)