myRT

myRT report for GCA_903171895.1_Kp2564

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Seq: CAESWU010000003.1 Klebsiella pneumoniae isolate Kp2564 genome assembly, contig: chr, whole genome shotgun sequence (5387569 bp)
Overview 1 RT 1: 2351975-2357708 bp 2 RT 2: 4171372-4176521 bp 3 RT 3: 4351736-4355589 bp 4 RT 4: 4729145-4732050 bp Neighborhood of RT #1 [2351975, 2357713] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [4171372, 4176529] umuC PRK10276 RVT-GII PinE Neighborhood of RT #3 [4351736, 4355589] umuC PRK10276 RVT-GII Neighborhood of RT #4 [4729145, 4732100] RVT-GII int Feature: gene Location: 2351975-2352826 bp Feature: domain Description: dam Location: 2351978-2352749 bp Feature: domain Description: dam Location: 2351 978-2352749 bp Feature: gene Location: 2352823-2355207 bp Feature: domain Description: Phage_GPA Location: 2353387-2354353 bp Feature: domain Description: Phage_GPA Location: 2353387-2354353 bp Feature: gene Location: 2355685-2357172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356090-2356780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356090-2356780 bp Feature: gene Location: 2357280-2357468 bp Feature: gene Location: 2357480-2357713 bp Feature: domain Description: DinI Location: 2357525-2357708 bp Feature: domain Description: DinI Location: 2357525-2357708 bp Feature: gene Location: 4171372-4172637 bp Feature: domain Description: umuC Location: 4171375-4172635 bp Feature: domain Description: umuC Location: 41 71 375-41 72635 bp Feature: gene Location: 4172639-4173058 bp Feature: domain Description: PRK10276 Location: 4172642-4173053 bp Feature: domain Description: PRK1 0276 Location: 41 72642-41 73053 bp Feature: gene Location: 4173138-4174622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4173540-4174230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 73540-41 74230 bp Feature: gene Location: 4174631-4174798 bp Feature: gene Location: 4176020-4176529 bp Feature: domain Description: PinE Location: 4176068-4176521 bp Feature: domain Description: PinE Location: 41 76068-41 76521 bp Feature: gene Location: 4351736-4353001 bp Feature: domain Description: umuC Location: 4351739-4352999 bp Feature: domain Description: umuC Location: 4351 739-4352999 bp Feature: gene Location: 4353004-4353423 bp Feature: domain Description: PRK10276 Location: 4353007-4353418 bp Feature: domain Description: PRK1 0276 Location: 4353007-435341 8 bp Feature: gene Location: 4353502-4354986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4353904-4354594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4353904-4354594 bp Feature: gene Location: 4354995-4355162 bp Feature: gene Location: 4355443-4355589 bp Feature: gene Location: 4729145-4730629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4729547-4730237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4729547-4730237 bp Feature: gene Location: 4730638-4730805 bp Feature: gene Location: 4731048-4732100 bp Feature: domain Description: int Location: 4731051-4732050 bp Feature: domain Description: int Location: 4731 051 -4732050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), int (PHA02601)

Seq: CAESWU010000005.1 Klebsiella pneumoniae isolate Kp2564 genome assembly, contig: plasmid_4, whole genome shotgun sequence (124343 bp)
Overview 1 RT 1: 38092-43435 bp Neighborhood of RT #1 [38092, 43572] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 38092-39363 bp Feature: domain Description: umuC Location: 38095-39358 bp Feature: domain Description: umuC Location: 38095-39358 bp Feature: gene Location: 39363-40037 bp Feature: domain Description: PRK10276 Location: 39615-40023 bp Feature: domain Description: PRK102 76 Location: 39615-4002 3 bp Feature: gene Location: 40191-41678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40596-41286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40596-412 86 bp Feature: gene Location: 41927-42898 bp Feature: domain Description: StbA Location: 41930-42875 bp Feature: domain Description: StbA Location: 41930-42 875 bp Feature: gene Location: 42901-43572 bp Feature: domain Description: Plasmid_stab_B Location: 42916-43123 bp Feature: domain Description: Plasmid_stab_B Location: 42 916-4312 3 bp Feature: domain Description: Plasmid_stab_B Location: 43228-43435 bp Feature: domain Description: Plasmid_stab_B Location: 432 2 8-43435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)