myRT

myRT report for GCA_903171915.1_Kp1264

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Seq: CAESWT010000001.1 Klebsiella pneumoniae isolate Kp1264 genome assembly, contig: chr, whole genome shotgun sequence (5225217 bp)
Overview 1 RT 1: 460101-464126 bp Neighborhood of RT #1 [460101, 465010] DinI RVT-GII Phage_GPA Feature: gene Location: 460101-460334 bp Feature: domain Description: DinI Location: 460143-460329 bp Feature: domain Description: DinI Location: 4601 43-460329 bp Feature: gene Location: 460345-460533 bp Feature: gene Location: 460634-462118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461036-461726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 036-461 726 bp Feature: gene Location: 462275-462508 bp Feature: gene Location: 462596-465010 bp Feature: domain Description: Phage_GPA Location: 463160-464126 bp Feature: domain Description: Phage_GPA Location: 4631 60-4641 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, Phage_GPA (pfam05840)

Seq: CAESWT010000002.1 Klebsiella pneumoniae isolate Kp1264 genome assembly, contig: plasmid_1, whole genome shotgun sequence (96957 bp)
Overview 1 RT 1: 86039-90813 bp Neighborhood of RT #1 [86039, 90869] umuC PRK10276 RVT-GII Rve Feature: gene Location: 86039-87310 bp Feature: domain Description: umuC Location: 86042-87302 bp Feature: domain Description: umuC Location: 86042 -87302 bp Feature: gene Location: 87310-88122 bp Feature: domain Description: PRK10276 Location: 87742-88105 bp Feature: domain Description: PRK102 76 Location: 87742 -88105 bp Feature: gene Location: 88147-89634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88552-89242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88552 -892 42 bp Feature: gene Location: 89703-89972 bp Feature: gene Location: 90165-90869 bp Feature: domain Description: Rve Location: 90168-90813 bp Feature: domain Description: Rve Location: 90168-90813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Rve (COG3316)

Seq: CAESWT010000003.1 Klebsiella pneumoniae isolate Kp1264 genome assembly, contig: plasmid_2, whole genome shotgun sequence (55297 bp)
Overview 1 RT 1: 1-3932 bp Neighborhood of RT #1 [1, 3934] PRK09951 RVT-UG11 umuC Feature: gene Location: 1-138 bp Feature: gene Location: 219-887 bp Feature: domain Description: PRK09951 Location: 222-885 bp Feature: domain Description: PRK09951 Location: 222-885 bp Feature: gene Location: 1088-1996 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1361-1817 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 13 61-1817 bp Feature: gene Location: 2256-2513 bp Feature: gene Location: 2669-3934 bp Feature: domain Description: umuC Location: 2672-3932 bp Feature: domain Description: umuC Location: 2672-3 93 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)