myRT

myRT report for GCA_903181435.1_NZ_B_acidifaciens_9G3_hyb

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Seq: CAEUHO010000001.1 Bacteroides acidifaciens isolate NZ_B_acidifaciens_9G3_hyb genome assembly, contig: gnlWUSMEFCGSSBBAACE33A1D18_1, whole genome shotgun sequence (2919888 bp)
Overview 1 RT 1: 1825931-1829540 bp 2 RT 2: 2705160-2718652 bp Neighborhood of RT #1 [1825931, 1829566] RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [2705160, 2718657] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons AAA-ATPase_like PDDEXK_9 Feature: gene Location: 1825931-1826224 bp Feature: gene Location: 1826423-1826701 bp Feature: gene Location: 1826664-1828100 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1827054-1827756 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 827054-1 827756 bp Feature: gene Location: 1828115-1828552 bp Feature: domain Description: Avd_like Location: 1828148-1828457 bp Feature: domain Description: Avd_like Location: 1 8281 48-1 828457 bp Feature: gene Location: 1828706-1829566 bp Feature: domain Description: DUF1566 Location: 1829291-1829540 bp Feature: domain Description: DUF1 566 Location: 1 829291 -1 829540 bp Feature: gene Location: 2705160-2706962 bp Feature: domain Description: rpsA Location: 2705232-2706825 bp Feature: domain Description: rpsA Location: 2705232-2706825 bp Feature: gene Location: 2707074-2713034 bp Feature: domain Description: DUF4011 Location: 2708289-2708802 bp Feature: domain Description: DUF401 1 Location: 2708289-2708802 bp Feature: domain Description: DEXXQc_SF1 Location: 2709141-2709579 bp Feature: domain Description: DEXXQc_SF1 Location: 27091 41 -2709579 bp Feature: domain Description: DEXXQc_SF1 Location: 2710563-2711328 bp Feature: domain Description: DEXXQc_SF1 Location: 271 0563-271 1 328 bp Feature: domain Description: TIGR00376 Location: 2711457-2711847 bp Feature: domain Description: TIGR00376 Location: 271 1 457-271 1 847 bp Feature: domain Description: MTES_1575 Location: 2712000-2712285 bp Feature: domain Description: MTES_1 575 Location: 271 2000-271 2285 bp Feature: domain Description: DUF3320 Location: 2712540-2712684 bp Feature: domain Description: DUF3320 Location: 271 2540-271 2684 bp Feature: gene Location: 2713051-2714109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2713300-2713840 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 271 3300-271 3840 bp Feature: gene Location: 2714314-2716521 bp Feature: gene Location: 2716945-2718657 bp Feature: domain Description: AAA-ATPase_like Location: 2716966-2717860 bp Feature: domain Description: AAA-ATPase_like Location: 271 6966-271 7860 bp Feature: domain Description: PDDEXK_9 Location: 2718316-2718652 bp Feature: domain Description: PDDEXK_9 Location: 271 831 6-271 8652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons
AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: CAEUHO010000004.1 Bacteroides acidifaciens isolate NZ_B_acidifaciens_9G3_hyb genome assembly, contig: gnlWUSMEFCGSSBBAACE33A1D18_2, whole genome shotgun sequence (1386722 bp)
Overview 1 RT 1: 902800-907521 bp Neighborhood of RT #1 [902800, 907718] IstB_IS21 HTH_23 COG4584 RVT-DGRs MethyltransfD12 Feature: gene Location: 902800-903573 bp Feature: domain Description: IstB_IS21 Location: 903001-903526 bp Feature: domain Description: IstB_IS2 1 Location: 903001-90352 6 bp Feature: gene Location: 903563-905128 bp Feature: domain Description: HTH_23 Location: 903572-903698 bp Feature: domain Description: HTH_2 3 Location: 903572 -903698 bp Feature: domain Description: COG4584 Location: 903824-904481 bp Feature: domain Description: COG4584 Location: 90382 4-904481 bp Feature: gene Location: 905350-906279 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 905356-905731 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 905356-905731 bp Feature: gene Location: 906289-906663 bp Feature: gene Location: 906897-907718 bp Feature: domain Description: MethyltransfD12 Location: 906933-907521 bp Feature: domain Description: MethyltransfD12 Location: 906933-90752 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), HTH_23 (pfam13384), COG4584 (Transposase ), RVT-DGRs, MethyltransfD12 (pfam02086)