myRT

myRT report for GCA_903181445.1_NZ_Bacteroides_fragilis_8E3_BL_hyb

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Seq: CAEUHN010000012.1 Bacteroides fragilis isolate NZ_Bacteroides_fragilis_8E3_BL_hyb genome assembly, contig: gnlWUSMEFCGSSBBAFR20EF4376_2, whole genome shotgun sequence (1763611 bp)
Overview 1 RT 1: 630423-635130 bp 2 RT 2: 1243341-1247332 bp Neighborhood of RT #1 [630423, 635130] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Neighborhood of RT #2 [1243341, 1247332] Macro_Poa1p_like RVT_N RVT-GII GIIM Feature: gene Location: 630423-630833 bp Feature: domain Description: Cas_Cmr5 Location: 630471-630753 bp Feature: domain Description: Cas_Cmr5 Location: 630471 -630753 bp Feature: gene Location: 630830-631780 bp Feature: domain Description: Cmr6_III-B Location: 630980-631769 bp Feature: domain Description: Cmr6_III-B Location: 630980-631 769 bp Feature: gene Location: 631800-634070 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 632007-632613 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 632007-63261 3 bp Feature: domain Description: Cas1_I-II-III Location: 633072-634029 bp Feature: domain Description: Cas1 _I-II-III Location: 633072-634029 bp Feature: gene Location: 634064-634354 bp Feature: domain Description: Cas2_I_II_III Location: 634091-634301 bp Feature: domain Description: Cas2_I_II_III Location: 634091 -634301 bp Feature: gene Location: 634993-635130 bp Feature: gene Location: 1243341-1243715 bp Feature: gene Location: 1243808-1244359 bp Feature: domain Description: Macro_Poa1p_like Location: 1243895-1244306 bp Feature: domain Description: Macro_Poa1 p_like Location: 1 243895-1 244306 bp Feature: gene Location: 1244405-1246075 bp Feature: domain Description: RVT_N Location: 1244630-1244873 bp Feature: domain Description: RVT_N Location: 1 244630-1 244873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1244918-1245566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24491 8-1 245566 bp Feature: domain Description: GIIM Note: maturase Location: 1245617-1245851 bp Feature: domain Description: GIIM Note: maturase Location: 1 24561 7-1 245851 bp Feature: gene Location: 1246115-1246336 bp Feature: gene Location: 1246598-1247332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), Macro_Poa1p_like, RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAEUHN010000018.1 Bacteroides fragilis isolate NZ_Bacteroides_fragilis_8E3_BL_hyb genome assembly, contig: gnlWUSMEFCGSSBBAFR20EF4376_3, whole genome shotgun sequence (632833 bp)
Overview 1 RT 1: 333674-340204 bp Neighborhood of RT #1 [333674, 340212] RVT-Retrons rpsA RNase_Z Feature: gene Location: 333674-335914 bp Feature: gene Location: 335929-336081 bp Feature: gene Location: 336124-337239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336439-336991 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 336439-336991 bp Feature: gene Location: 337381-339174 bp Feature: domain Description: rpsA Location: 337459-339067 bp Feature: domain Description: rpsA Location: 337459-339067 bp Feature: gene Location: 339298-340212 bp Feature: domain Description: RNase_Z Location: 339313-340204 bp Feature: domain Description: RNase_Z Location: 339313-3402 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)