myRT

myRT report for GCA_903231415.1_IST4131

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Seq: CAFBRP010000049.1 Burkholderia cenocepacia strain IST4131 genome assembly, contig: sc12|si236914, whole genome shotgun sequence (236914 bp)
Overview 1 RT 1: 66021-71185 bp Neighborhood of RT #1 [66021, 71301] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 66021-66737 bp Ori: CAB5088451.1 Feature: domain Description: YrrM Location: 66237-66726 bp Feature: domain Description: YrrM Location: 66237-66726 bp Feature: gene Location: 67961-68053 bp Feature: gene Location: 68065-69435 bp Ori: CAB5088473.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 68293-68899 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 68293-68899 bp Feature: gene Location: 69474-69716 bp Ori: CAB5088484.1 Feature: domain Description: Resolvase Location: 69477-69573 bp Feature: domain Description: Resolvase Location: 69477-69573 bp Feature: domain Description: HTH_Hin_like Location: 69582-69702 bp Feature: domain Description: HTH_Hin_like Location: 69582-69702 bp Feature: gene Location: 70417-71301 bp Ori: CAB5088491.1 Feature: domain Description: DUF4238 Location: 70597-71185 bp Feature: domain Description: DUF4238 Location: 70597-71 1 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)

Seq: CAFBRP010000052.1 Burkholderia cenocepacia strain IST4131 genome assembly, contig: sc15|si182473, whole genome shotgun sequence (182473 bp)
Overview 1 RT 1: 43598-48736 bp Neighborhood of RT #1 [43598, 48804] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 43598-44026 bp Ori: CAB5095768.1 Feature: domain Description: PRK14673 Location: 43601-44018 bp Feature: domain Description: PRK14673 Location: 43601-44018 bp Feature: gene Location: 44073-44960 bp Ori: CAB5095770.1 Feature: domain Description: RsmI Location: 44121-44934 bp Feature: domain Description: RsmI Location: 4412 1-44934 bp Feature: gene Location: 45068-46357 bp Ori: CAB5095784.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45323-45938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4532 3-45938 bp Feature: domain Description: GIIM Note: maturase Location: 45998-46199 bp Feature: domain Description: GIIM Note: maturase Location: 45998-46199 bp Feature: gene Location: 46893-47504 bp Ori: CAB5095795.1 Feature: domain Description: RlpA Location: 46965-47469 bp Feature: domain Description: RlpA Location: 46965-47469 bp Feature: gene Location: 48160-48804 bp Ori: CAB5095809.1 Feature: domain Description: YcbL-like_MBL-fold Location: 48172-48736 bp Feature: domain Description: YcbL-like_MBL-fold Location: 48172 -48736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)

Seq: CAFBRP010000087.1 Burkholderia cenocepacia strain IST4131 genome assembly, contig: sc4|si469225, whole genome shotgun sequence (469225 bp)
Overview 1 RT 1: 139108-144439 bp Neighborhood of RT #1 [139108, 144462] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 139108-139863 bp Ori: CAB5157363.1 Feature: domain Description: his_ut_repres Location: 139186-139858 bp Feature: domain Description: his_ut_repres Location: 13 9186-13 9858 bp Feature: gene Location: 140098-140670 bp Ori: CAB5157378.1 Feature: domain Description: FIN Location: 140284-140635 bp Feature: domain Description: FIN Location: 140284-14063 5 bp Feature: gene Location: 140924-142273 bp Ori: CAB5157393.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141389-142025 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1413 89-142025 bp Feature: gene Location: 142599-142928 bp Ori: CAB5157413.1 Feature: domain Description: Histone_HNS Location: 142620-142857 bp Feature: domain Description: Histone_HNS Location: 142620-142857 bp Feature: gene Location: 143215-144462 bp Ori: CAB5157429.1 Feature: domain Description: MFS_MucK Location: 143305-144439 bp Feature: domain Description: MFS_MucK Location: 143 3 05-14443 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)