myRT

myRT report for GCA_903231425.1_IST4129

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Seq: CAFBRG010000036.1 Burkholderia cenocepacia strain IST4129 genome assembly, contig: sc11|si182921, whole genome shotgun sequence (182921 bp)
Overview 1 RT 1: 11950-17114 bp Neighborhood of RT #1 [11950, 17230] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 11950-12666 bp Ori: CAB5082041.1 Feature: domain Description: YrrM Location: 12166-12655 bp Feature: domain Description: YrrM Location: 1 21 66-1 2655 bp Feature: gene Location: 13890-13982 bp Feature: gene Location: 13994-15364 bp Ori: CAB5082060.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14222-14828 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 4222-1 4828 bp Feature: gene Location: 15403-15645 bp Ori: CAB5082071.1 Feature: domain Description: Resolvase Location: 15406-15502 bp Feature: domain Description: Resolvase Location: 1 5406-1 5502 bp Feature: domain Description: HTH_Hin_like Location: 15511-15631 bp Feature: domain Description: HTH_Hin_like Location: 1 551 1 -1 5631 bp Feature: gene Location: 16346-17230 bp Ori: CAB5082083.1 Feature: domain Description: DUF4238 Location: 16526-17114 bp Feature: domain Description: DUF4238 Location: 1 6526-1 71 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)

Seq: CAFBRG010000035.1 Burkholderia cenocepacia strain IST4129 genome assembly, contig: sc10|si183225, whole genome shotgun sequence (183225 bp)
Overview 1 RT 1: 44372-49510 bp Neighborhood of RT #1 [44372, 49578] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 44372-44800 bp Ori: CAB5079919.1 Feature: domain Description: PRK14673 Location: 44375-44792 bp Feature: domain Description: PRK14673 Location: 44375-44792 bp Feature: gene Location: 44847-45734 bp Ori: CAB5079922.1 Feature: domain Description: RsmI Location: 44895-45708 bp Feature: domain Description: RsmI Location: 44895-45708 bp Feature: gene Location: 45842-47131 bp Ori: CAB5079925.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46097-46712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46097-46712 bp Feature: domain Description: GIIM Note: maturase Location: 46772-46973 bp Feature: domain Description: GIIM Note: maturase Location: 46772 -46973 bp Feature: gene Location: 47667-48278 bp Ori: CAB5079928.1 Feature: domain Description: RlpA Location: 47739-48243 bp Feature: domain Description: RlpA Location: 47739-482 43 bp Feature: gene Location: 48934-49578 bp Ori: CAB5079931.1 Feature: domain Description: YcbL-like_MBL-fold Location: 48946-49510 bp Feature: domain Description: YcbL-like_MBL-fold Location: 48946-49510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)