myRT

myRT report for GCA_903231465.1_IST4110

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Seq: CAFBRI010000138.1 Burkholderia cenocepacia strain IST4110 genome assembly, contig: sc9|si267557, whole genome shotgun sequence (267557 bp)
Overview 1 RT 1: 134458-139789 bp Neighborhood of RT #1 [134458, 139812] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 134458-135213 bp Ori: CAB5176907.1 Feature: domain Description: his_ut_repres Location: 134536-135208 bp Feature: domain Description: his_ut_repres Location: 1 34536-1 35208 bp Feature: gene Location: 135448-136020 bp Ori: CAB5176916.1 Feature: domain Description: FIN Location: 135634-135985 bp Feature: domain Description: FIN Location: 1 35634-1 35985 bp Feature: gene Location: 136274-137623 bp Ori: CAB5176926.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136739-137375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 36739-1 37375 bp Feature: gene Location: 137949-138278 bp Ori: CAB5176935.1 Feature: domain Description: Histone_HNS Location: 137970-138207 bp Feature: domain Description: Histone_HNS Location: 1 37970-1 38207 bp Feature: gene Location: 138565-139812 bp Ori: CAB5176939.1 Feature: domain Description: MFS_MucK Location: 138655-139789 bp Feature: domain Description: MFS_MucK Location: 1 38655-1 39789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CAFBRI010000073.1 Burkholderia cenocepacia strain IST4110 genome assembly, contig: sc13|si182756, whole genome shotgun sequence (182756 bp)
Overview 1 RT 1: 11792-16956 bp Neighborhood of RT #1 [11792, 17072] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 11792-12508 bp Ori: CAB5087610.1 Feature: domain Description: YrrM Location: 12008-12497 bp Feature: domain Description: YrrM Location: 12 008-12 497 bp Feature: gene Location: 13732-13824 bp Feature: gene Location: 13836-15206 bp Ori: CAB5087628.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14064-14670 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14064-14670 bp Feature: gene Location: 15245-15487 bp Ori: CAB5087638.1 Feature: domain Description: Resolvase Location: 15248-15344 bp Feature: domain Description: Resolvase Location: 152 48-15344 bp Feature: domain Description: HTH_Hin_like Location: 15353-15473 bp Feature: domain Description: HTH_Hin_like Location: 15353-15473 bp Feature: gene Location: 16188-17072 bp Ori: CAB5087647.1 Feature: domain Description: DUF4238 Location: 16368-16956 bp Feature: domain Description: DUF42 38 Location: 16368-16956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)

Seq: CAFBRI010000079.1 Burkholderia cenocepacia strain IST4110 genome assembly, contig: sc19|si147897, whole genome shotgun sequence (147897 bp)
Overview 1 RT 1: 9022-14160 bp Neighborhood of RT #1 [9022, 14228] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 9022-9450 bp Ori: CAB5099602.1 Feature: domain Description: PRK14673 Location: 9025-9442 bp Feature: domain Description: PRK14673 Location: 9025-9442 bp Feature: gene Location: 9497-10384 bp Ori: CAB5099614.1 Feature: domain Description: RsmI Location: 9545-10358 bp Feature: domain Description: RsmI Location: 9545-103 58 bp Feature: gene Location: 10492-11781 bp Ori: CAB5099624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10747-11362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10747-113 62 bp Feature: domain Description: GIIM Note: maturase Location: 11422-11623 bp Feature: domain Description: GIIM Note: maturase Location: 11422-11623 bp Feature: gene Location: 12317-12928 bp Ori: CAB5099635.1 Feature: domain Description: RlpA Location: 12389-12893 bp Feature: domain Description: RlpA Location: 123 89-12893 bp Feature: gene Location: 13584-14228 bp Ori: CAB5099648.1 Feature: domain Description: YcbL-like_MBL-fold Location: 13596-14160 bp Feature: domain Description: YcbL-like_MBL-fold Location: 13 596-14160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)