myRT

myRT report for GCA_903231475.1_IST4134

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Seq: CAFBRJ010000074.1 Burkholderia cenocepacia strain IST4134 genome assembly, contig: sc28|si77126, whole genome shotgun sequence (77126 bp)
Overview 1 RT 1: 43576-48714 bp Neighborhood of RT #1 [43576, 48782] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 43576-44004 bp Ori: CAB5127249.1 Feature: domain Description: PRK14673 Location: 43579-43996 bp Feature: domain Description: PRK1 4673 Location: 43579-43996 bp Feature: gene Location: 44051-44938 bp Ori: CAB5127264.1 Feature: domain Description: RsmI Location: 44099-44912 bp Feature: domain Description: RsmI Location: 44099-4491 2 bp Feature: gene Location: 45046-46335 bp Ori: CAB5127280.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45301-45916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45301 -4591 6 bp Feature: domain Description: GIIM Note: maturase Location: 45976-46177 bp Feature: domain Description: GIIM Note: maturase Location: 45976-461 77 bp Feature: gene Location: 46871-47482 bp Ori: CAB5127295.1 Feature: domain Description: RlpA Location: 46943-47447 bp Feature: domain Description: RlpA Location: 46943-47447 bp Feature: gene Location: 48138-48782 bp Ori: CAB5127308.1 Feature: domain Description: YcbL-like_MBL-fold Location: 48150-48714 bp Feature: domain Description: YcbL-like_MBL-fold Location: 481 50-4871 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)

Seq: CAFBRJ010000107.1 Burkholderia cenocepacia strain IST4134 genome assembly, contig: sc8|si275874, whole genome shotgun sequence (275874 bp)
Overview 1 RT 1: 138683-144014 bp Neighborhood of RT #1 [138683, 144037] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 138683-139438 bp Ori: CAB5174300.1 Feature: domain Description: his_ut_repres Location: 138761-139433 bp Feature: domain Description: his_ut_repres Location: 138761-139433 bp Feature: gene Location: 139673-140245 bp Ori: CAB5174306.1 Feature: domain Description: FIN Location: 139859-140210 bp Feature: domain Description: FIN Location: 139859-1402 10 bp Feature: gene Location: 140499-141848 bp Ori: CAB5174316.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140964-141600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140964-141600 bp Feature: gene Location: 142174-142503 bp Ori: CAB5174326.1 Feature: domain Description: Histone_HNS Location: 142195-142432 bp Feature: domain Description: Histone_HNS Location: 142 195-142 432 bp Feature: gene Location: 142790-144037 bp Ori: CAB5174334.1 Feature: domain Description: MFS_MucK Location: 142880-144014 bp Feature: domain Description: MFS_MucK Location: 142 880-144014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CAFBRJ010000058.1 Burkholderia cenocepacia strain IST4134 genome assembly, contig: sc13|si183208, whole genome shotgun sequence (183208 bp)
Overview 1 RT 1: 11770-16934 bp Neighborhood of RT #1 [11770, 17050] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 11770-12486 bp Ori: CAB5087364.1 Feature: domain Description: YrrM Location: 11986-12475 bp Feature: domain Description: YrrM Location: 11986-12475 bp Feature: gene Location: 13710-13802 bp Feature: gene Location: 13814-15184 bp Ori: CAB5087388.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14042-14648 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14042-14648 bp Feature: gene Location: 15223-15465 bp Ori: CAB5087401.1 Feature: domain Description: Resolvase Location: 15226-15322 bp Feature: domain Description: Resolvase Location: 15226-153 22 bp Feature: domain Description: HTH_Hin_like Location: 15331-15451 bp Feature: domain Description: HTH_Hin_like Location: 153 3 1-15451 bp Feature: gene Location: 16166-17050 bp Ori: CAB5087415.1 Feature: domain Description: DUF4238 Location: 16346-16934 bp Feature: domain Description: DUF423 8 Location: 163 46-1693 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)