myRT

myRT report for GCA_903231525.1_IST4116B

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Seq: CAFBRO010000084.1 Burkholderia cenocepacia strain IST4116B genome assembly, contig: sc3|si505859, whole genome shotgun sequence (505859 bp)
Overview 1 RT 1: 175651-180982 bp Neighborhood of RT #1 [175651, 181005] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 175651-176406 bp Ori: CAB5151375.1 Feature: domain Description: his_ut_repres Location: 175729-176401 bp Feature: domain Description: his_ut_repres Location: 1 75729-1 76401 bp Feature: gene Location: 176641-177213 bp Ori: CAB5151392.1 Feature: domain Description: FIN Location: 176827-177178 bp Feature: domain Description: FIN Location: 1 76827-1 771 78 bp Feature: gene Location: 177467-178816 bp Ori: CAB5151409.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 177932-178568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 77932-1 78568 bp Feature: gene Location: 179142-179471 bp Ori: CAB5151427.1 Feature: domain Description: Histone_HNS Location: 179163-179400 bp Feature: domain Description: Histone_HNS Location: 1 791 63-1 79400 bp Feature: gene Location: 179758-181005 bp Ori: CAB5151443.1 Feature: domain Description: MFS_MucK Location: 179848-180982 bp Feature: domain Description: MFS_MucK Location: 1 79848-1 80982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CAFBRO010000057.1 Burkholderia cenocepacia strain IST4116B genome assembly, contig: sc15|si182710, whole genome shotgun sequence (182710 bp)
Overview 1 RT 1: 11792-16956 bp Neighborhood of RT #1 [11792, 17072] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 11792-12508 bp Ori: CAB5095571.1 Feature: domain Description: YrrM Location: 12008-12497 bp Feature: domain Description: YrrM Location: 12 008-12 497 bp Feature: gene Location: 13732-13824 bp Feature: gene Location: 13836-15206 bp Ori: CAB5095600.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14064-14670 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14064-14670 bp Feature: gene Location: 15245-15487 bp Ori: CAB5095614.1 Feature: domain Description: Resolvase Location: 15248-15344 bp Feature: domain Description: Resolvase Location: 152 48-15344 bp Feature: domain Description: HTH_Hin_like Location: 15353-15473 bp Feature: domain Description: HTH_Hin_like Location: 15353-15473 bp Feature: gene Location: 16188-17072 bp Ori: CAB5095626.1 Feature: domain Description: DUF4238 Location: 16368-16956 bp Feature: domain Description: DUF42 38 Location: 16368-16956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)

Seq: CAFBRO010000058.1 Burkholderia cenocepacia strain IST4116B genome assembly, contig: sc16|si182480, whole genome shotgun sequence (182480 bp)
Overview 1 RT 1: 43598-48736 bp Neighborhood of RT #1 [43598, 48804] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 43598-44026 bp Ori: CAB5097861.1 Feature: domain Description: PRK14673 Location: 43601-44018 bp Feature: domain Description: PRK14673 Location: 43 601-44018 bp Feature: gene Location: 44073-44960 bp Ori: CAB5097875.1 Feature: domain Description: RsmI Location: 44121-44934 bp Feature: domain Description: RsmI Location: 44121-4493 4 bp Feature: gene Location: 45068-46357 bp Ori: CAB5097887.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45323-45938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 23 -4593 8 bp Feature: domain Description: GIIM Note: maturase Location: 45998-46199 bp Feature: domain Description: GIIM Note: maturase Location: 45998-46199 bp Feature: gene Location: 46893-47504 bp Ori: CAB5097900.1 Feature: domain Description: RlpA Location: 46965-47469 bp Feature: domain Description: RlpA Location: 46965-47469 bp Feature: gene Location: 48160-48804 bp Ori: CAB5097913.1 Feature: domain Description: YcbL-like_MBL-fold Location: 48172-48736 bp Feature: domain Description: YcbL-like_MBL-fold Location: 48172-4873 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)