myRT

myRT report for GCA_903231535.1_IST4113

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Seq: CAFBRL010000062.1 Burkholderia cenocepacia strain IST4113 genome assembly, contig: sc13|si183104, whole genome shotgun sequence (183104 bp)
Overview 1 RT 1: 11950-17114 bp Neighborhood of RT #1 [11950, 17230] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 11950-12666 bp Ori: CAB5092247.1 Feature: domain Description: YrrM Location: 12166-12655 bp Feature: domain Description: YrrM Location: 1 21 66-1 2655 bp Feature: gene Location: 13890-13982 bp Feature: gene Location: 13994-15364 bp Ori: CAB5092276.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14222-14828 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 4222-1 4828 bp Feature: gene Location: 15403-15645 bp Ori: CAB5092284.1 Feature: domain Description: Resolvase Location: 15406-15502 bp Feature: domain Description: Resolvase Location: 1 5406-1 5502 bp Feature: domain Description: HTH_Hin_like Location: 15511-15631 bp Feature: domain Description: HTH_Hin_like Location: 1 551 1 -1 5631 bp Feature: gene Location: 16346-17230 bp Ori: CAB5092299.1 Feature: domain Description: DUF4238 Location: 16526-17114 bp Feature: domain Description: DUF4238 Location: 1 6526-1 71 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)

Seq: CAFBRL010000114.1 Burkholderia cenocepacia strain IST4113 genome assembly, contig: sc7|si275874, whole genome shotgun sequence (275874 bp)
Overview 1 RT 1: 138683-144014 bp Neighborhood of RT #1 [138683, 144037] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 138683-139438 bp Ori: CAB5172798.1 Feature: domain Description: his_ut_repres Location: 138761-139433 bp Feature: domain Description: his_ut_repres Location: 138761-139433 bp Feature: gene Location: 139673-140245 bp Ori: CAB5172808.1 Feature: domain Description: FIN Location: 139859-140210 bp Feature: domain Description: FIN Location: 139859-1402 10 bp Feature: gene Location: 140499-141848 bp Ori: CAB5172818.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140964-141600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140964-141600 bp Feature: gene Location: 142174-142503 bp Ori: CAB5172828.1 Feature: domain Description: Histone_HNS Location: 142195-142432 bp Feature: domain Description: Histone_HNS Location: 142 195-142 432 bp Feature: gene Location: 142790-144037 bp Ori: CAB5172838.1 Feature: domain Description: MFS_MucK Location: 142880-144014 bp Feature: domain Description: MFS_MucK Location: 142 880-144014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CAFBRL010000079.1 Burkholderia cenocepacia strain IST4113 genome assembly, contig: sc29|si76595, whole genome shotgun sequence (76595 bp)
Overview 1 RT 1: 43576-48714 bp Neighborhood of RT #1 [43576, 48782] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 43576-44004 bp Ori: CAB5129215.1 Feature: domain Description: PRK14673 Location: 43579-43996 bp Feature: domain Description: PRK14673 Location: 43 579-43 996 bp Feature: gene Location: 44051-44938 bp Ori: CAB5129230.1 Feature: domain Description: RsmI Location: 44099-44912 bp Feature: domain Description: RsmI Location: 44099-44912 bp Feature: gene Location: 45046-46335 bp Ori: CAB5129244.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45301-45916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 01-45916 bp Feature: domain Description: GIIM Note: maturase Location: 45976-46177 bp Feature: domain Description: GIIM Note: maturase Location: 45976-46177 bp Feature: gene Location: 46871-47482 bp Ori: CAB5129259.1 Feature: domain Description: RlpA Location: 46943-47447 bp Feature: domain Description: RlpA Location: 46943 -47447 bp Feature: gene Location: 48138-48782 bp Ori: CAB5129275.1 Feature: domain Description: YcbL-like_MBL-fold Location: 48150-48714 bp Feature: domain Description: YcbL-like_MBL-fold Location: 48150-48714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)