myRT

myRT report for GCA_903470625.1_WGS_IST4103

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Seq: CAGKPA010000138.1 Burkholderia cenocepacia strain IST4103 genome assembly, contig: sc7|si266759, whole genome shotgun sequence (266759 bp)
Overview 1 RT 1: 134020-139351 bp Neighborhood of RT #1 [134020, 139374] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 134020-134775 bp Ori: CAB5354476.1 Feature: domain Description: his_ut_repres Location: 134098-134770 bp Feature: domain Description: his_ut_repres Location: 1 34098-1 34770 bp Feature: gene Location: 135010-135582 bp Ori: CAB5354480.1 Feature: domain Description: FIN Location: 135196-135547 bp Feature: domain Description: FIN Location: 1 351 96-1 35547 bp Feature: gene Location: 135836-137185 bp Ori: CAB5354484.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136301-136937 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 36301 -1 36937 bp Feature: gene Location: 137511-137840 bp Ori: CAB5354488.1 Feature: domain Description: Histone_HNS Location: 137532-137769 bp Feature: domain Description: Histone_HNS Location: 1 37532-1 37769 bp Feature: gene Location: 138127-139374 bp Ori: CAB5354492.1 Feature: domain Description: MFS_MucK Location: 138217-139351 bp Feature: domain Description: MFS_MucK Location: 1 3821 7-1 39351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: CAGKPA010000074.1 Burkholderia cenocepacia strain IST4103 genome assembly, contig: sc13|si182607, whole genome shotgun sequence (182607 bp)
Overview 1 RT 1: 11792-16956 bp Neighborhood of RT #1 [11792, 17072] YrrM RVT-UG17 Resolvase HTH_Hin_like DUF4238 Feature: gene Location: 11792-12508 bp Ori: CAB5297676.1 Feature: domain Description: YrrM Location: 12008-12497 bp Feature: domain Description: YrrM Location: 12 008-12 497 bp Feature: gene Location: 13732-13824 bp Feature: gene Location: 13836-15206 bp Ori: CAB5297701.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14064-14670 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14064-14670 bp Feature: gene Location: 15245-15487 bp Ori: CAB5297713.1 Feature: domain Description: Resolvase Location: 15248-15344 bp Feature: domain Description: Resolvase Location: 152 48-15344 bp Feature: domain Description: HTH_Hin_like Location: 15353-15473 bp Feature: domain Description: HTH_Hin_like Location: 15353-15473 bp Feature: gene Location: 16188-17072 bp Ori: CAB5297725.1 Feature: domain Description: DUF4238 Location: 16368-16956 bp Feature: domain Description: DUF42 38 Location: 16368-16956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YrrM (COG4122), RVT-UG17, Resolvase (smart00857), HTH_Hin_like (cd00569), DUF4238 (pfam14022)

Seq: CAGKPA010000075.1 Burkholderia cenocepacia strain IST4103 genome assembly, contig: sc14|si182473, whole genome shotgun sequence (182473 bp)
Overview 1 RT 1: 43598-48736 bp Neighborhood of RT #1 [43598, 48804] PRK14673 RsmI RVT-GII GIIM RlpA YcbL-like_MBL-fold Feature: gene Location: 43598-44026 bp Ori: CAB5300315.1 Feature: domain Description: PRK14673 Location: 43601-44018 bp Feature: domain Description: PRK14673 Location: 43 601-44018 bp Feature: gene Location: 44073-44960 bp Ori: CAB5300328.1 Feature: domain Description: RsmI Location: 44121-44934 bp Feature: domain Description: RsmI Location: 44121-4493 4 bp Feature: gene Location: 45068-46357 bp Ori: CAB5300341.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45323-45938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 23 -4593 8 bp Feature: domain Description: GIIM Note: maturase Location: 45998-46199 bp Feature: domain Description: GIIM Note: maturase Location: 45998-46199 bp Feature: gene Location: 46893-47504 bp Ori: CAB5300354.1 Feature: domain Description: RlpA Location: 46965-47469 bp Feature: domain Description: RlpA Location: 46965-47469 bp Feature: gene Location: 48160-48804 bp Ori: CAB5300367.1 Feature: domain Description: YcbL-like_MBL-fold Location: 48172-48736 bp Feature: domain Description: YcbL-like_MBL-fold Location: 48172-4873 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14673 (hypothetical protein; Provisional), RsmI (COG0313), RVT-GII, GIIM (pfam08388), RlpA (COG0797), YcbL-like_MBL-fold (cd07737)