myRT

myRT report for GCA_903642255.1_MAGs_Cladonia_concoct_37_sub

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Seq: CAHJWP010000001.1 Sphingomonadaceae bacterium isolate Lichen_MAGs_cladonia3 genome assembly, contig: NODE_34_length_80955_cov_12.969881, whole genome shotgun sequence (80955 bp)
Overview 1 RT 1: 68106-72819 bp Neighborhood of RT #1 [68106, 72819] PRK09692 RVT-G2L4 Feature: gene Location: 68106-68378 bp Feature: gene Location: 68500-69741 bp Feature: domain Description: PRK09692 Location: 68506-69673 bp Feature: domain Description: PRK09692 Location: 68506-69673 bp Feature: gene Location: 70160-71452 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 70373-70994 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 70373-70994 bp Feature: gene Location: 71501-72184 bp Feature: gene Location: 72286-72819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-G2L4

Seq: CAHJWP010000006.1 Sphingomonadaceae bacterium isolate Lichen_MAGs_cladonia3 genome assembly, contig: NODE_177_length_40781_cov_11.193912, whole genome shotgun sequence (40781 bp)
Overview 1 RT 1: 20278-26591 bp Neighborhood of RT #1 [20278, 26839] Zn_Tnp_IS1595 DDE_Tnp_IS1595 RVT-Retrons KOG4180 KOG4180 Feature: gene Location: 20278-21180 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 20341-20482 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 2 0341-2 0482 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 20689-21130 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 2 0689-2 1130 bp Feature: gene Location: 21442-22005 bp Feature: gene Location: 23760-24908 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23877-24474 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 3877-2 4474 bp Feature: gene Location: 25317-25496 bp Feature: gene Location: 25946-26839 bp Feature: domain Description: KOG4180 Location: 25997-26312 bp Feature: domain Description: KOG4180 Location: 2 5997-2 6312 bp Feature: domain Description: KOG4180 Location: 26423-26591 bp Feature: domain Description: KOG4180 Location: 2 642 3-2 6591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS1595 (pfam12760), DDE_Tnp_IS1595 (pfam12762), RVT-Retrons, KOG4180 (KOG4180, Predicted kinase )