myRT

myRT report for GCA_903789595.1_UMB00020

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Seq: CAIFEZ010000019.1 uncultured eubacterium 1-6 isolate UMB00020 genome assembly, contig: NODE_155_length_69851_cov_378.288326, whole genome shotgun sequence (69851 bp)
Overview 1 RT 1: 5215-9197 bp Neighborhood of RT #1 [5215, 9197] rve_3 RVT-GII COG3177 Feature: gene Location: 5215-5451 bp Feature: domain Description: rve_3 Location: 5242-5398 bp Feature: domain Description: rve_3 Location: 5242-5398 bp Feature: gene Location: 5802-6014 bp Feature: gene Location: 6259-7407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6367-7057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6367-7057 bp Feature: gene Location: 7581-8642 bp Feature: domain Description: COG3177 Location: 7611-8607 bp Feature: domain Description: COG31 77 Location: 761 1 -8607 bp Feature: gene Location: 8883-9197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-GII, COG3177 (Fic family protein )

Seq: CAIFEZ010000039.1 uncultured eubacterium 1-6 isolate UMB00020 genome assembly, contig: NODE_517_length_23783_cov_415.098196, whole genome shotgun sequence (23783 bp)
Overview 1 RT 1: 3537-6346 bp Neighborhood of RT #1 [3537, 6346] RVT-UG2 Feature: gene Location: 3537-3707 bp Feature: gene Location: 3861-3992 bp Feature: gene Location: 4031-5455 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4358-5189 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4358-5189 bp Feature: gene Location: 5507-5956 bp Feature: gene Location: 6065-6346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2

Seq: CAIFEZ010000050.1 uncultured eubacterium 1-6 isolate UMB00020 genome assembly, contig: NODE_951_length_9852_cov_465.860774, whole genome shotgun sequence (9852 bp)
Overview 1 RT 1: 2379-7275 bp Neighborhood of RT #1 [2379, 7877] SecB RVT-UG2 COG5421 COG5421 AbiH Feature: gene Location: 2379-3011 bp Feature: gene Location: 3043-3456 bp Feature: domain Description: SecB Location: 3079-3451 bp Feature: domain Description: SecB Location: 3 079-3 451 bp Feature: gene Location: 3616-4989 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3892-4723 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3 892-4723 bp Feature: gene Location: 5010-6149 bp Feature: domain Description: COG5421 Location: 5163-5406 bp Feature: domain Description: COG5421 Location: 5163 -5406 bp Feature: domain Description: COG5421 Location: 5679-5940 bp Feature: domain Description: COG5421 Location: 5679-5940 bp Feature: gene Location: 6474-7877 bp Feature: domain Description: AbiH Location: 6501-7275 bp Feature: domain Description: AbiH Location: 6501-7275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SecB (pfam02556), RVT-UG2, COG5421 (Transposase ), AbiH (pfam14253)