myRT

myRT report for GCA_903797735.1_B646

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Seq: CAIGKD010000009.1 Sphingobium yanoikuyae isolate 12 genome assembly, contig: NODE_9_length_238572_cov_36.525476, whole genome shotgun sequence (238572 bp)
Overview 1 RT 1: 90201-96079 bp Neighborhood of RT #1 [90201, 96093] PinE Zn_ribbon_recom Recombinase RVT-GII GIIM RpoE Feature: gene Location: 90201-90605 bp Feature: gene Location: 90599-92680 bp Feature: domain Description: PinE Location: 90659-91337 bp Feature: domain Description: PinE Location: 90659-91 337 bp Feature: domain Description: Zn_ribbon_recom Location: 91607-91763 bp Feature: domain Description: Zn_ribbon_recom Location: 91 607-91 763 bp Feature: domain Description: Recombinase Location: 92288-92411 bp Feature: domain Description: Recombinase Location: 92288-9241 1 bp Feature: gene Location: 93553-95079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93859-94576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93859-94576 bp Feature: domain Description: GIIM Note: maturase Location: 94654-94879 bp Feature: domain Description: GIIM Note: maturase Location: 94654-94879 bp Feature: gene Location: 95106-95249 bp Feature: gene Location: 95578-96093 bp Feature: domain Description: RpoE Location: 95596-96079 bp Feature: domain Description: RpoE Location: 95596-96079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), Recombinase (pfam07508), RVT-GII, GIIM (pfam08388), RpoE (COG3343)