myRT

myRT report for GCA_903832355.1_freshwater_MAG_---_LJ-3-9m_bin-548

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Seq: CAILBH010000007.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:007/216, whole genome shotgun sequence (2026 bp)
Overview 1 RT 1: 67-1826 bp Neighborhood of RT #1 [67, 2023] RVT_N RVT-GII GIIM DUF4143 Feature: gene Location: 67-1695 bp Feature: domain Description: RVT_N Location: 172-415 bp Feature: domain Description: RVT_N Location: 1 72-41 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1 096 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1324 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 47-1 324 bp Feature: gene Location: 1727-2023 bp Feature: domain Description: DUF4143 Location: 1733-1826 bp Feature: domain Description: DUF41 43 Location: 1 733-1 826 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000041.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:041/216, whole genome shotgun sequence (16734 bp)
Overview 1 RT 1: 67-2642 bp Neighborhood of RT #1 [67, 2680] RVT_N RVT-GII GIIM DUF45 Feature: gene Location: 67-1620 bp Feature: domain Description: RVT_N Location: 172-415 bp Feature: domain Description: RVT_N Location: 172 -415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1147-1381 bp Feature: gene Location: 1538-1930 bp Feature: gene Location: 1958-2680 bp Feature: domain Description: DUF45 Location: 2030-2642 bp Feature: domain Description: DUF45 Location: 2 030-2 642 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000042.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:042/216, whole genome shotgun sequence (34971 bp)
Overview 1 RT 1: 31255-34839 bp Neighborhood of RT #1 [31255, 34862] MauE Y1_Tnp COG2522 RVT-DGRs Avd_like Feature: gene Location: 31255-31695 bp Feature: domain Description: MauE Location: 31285-31678 bp Feature: domain Description: MauE Location: 3 1285-3 1678 bp Feature: gene Location: 31712-32680 bp Feature: domain Description: Y1_Tnp Location: 31754-32075 bp Feature: domain Description: Y1_Tnp Location: 3 1754-3 2075 bp Feature: domain Description: COG2522 Location: 32555-32660 bp Feature: domain Description: COG2522 Location: 3 2555-3 2660 bp Feature: gene Location: 32943-34160 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 33174-33873 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 3 174-3 3 873 bp Feature: gene Location: 34157-34471 bp Feature: gene Location: 34509-34862 bp Feature: domain Description: Avd_like Location: 34536-34839 bp Feature: domain Description: Avd_like Location: 3 453 6-3 483 9 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000064.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:064/216, whole genome shotgun sequence (2868 bp)
Overview 1 RT 1: 318-2838 bp Neighborhood of RT #1 [318, 2861] RVT_N RVT-GII GIIM UPF0175 Feature: gene Location: 318-677 bp Feature: gene Location: 692-2191 bp Feature: domain Description: RVT_N Location: 737-980 bp Feature: domain Description: RVT_N Location: 737-980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025-1667 bp Feature: domain Description: GIIM Note: maturase Location: 1718-1952 bp Feature: domain Description: GIIM Note: maturase Location: 1718-1952 bp Feature: gene Location: 2390-2587 bp Feature: gene Location: 2601-2861 bp Feature: domain Description: UPF0175 Location: 2631-2838 bp Feature: domain Description: UPF0175 Location: 2631-2838 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000070.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:070/216, whole genome shotgun sequence (3275 bp)
Overview 1 RT 1: 1-3274 bp Neighborhood of RT #1 [1, 3273] DUF3427 RVT-AbiP2 HNHc antidote_HigA Feature: gene Location: 1-606 bp Feature: domain Description: DUF3427 Location: 148-586 bp Feature: domain Description: DUF3427 Location: 148-5 86 bp Feature: gene Location: 643-2145 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1096-1558 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1096-15 5 8 bp Feature: gene Location: 2396-2761 bp Feature: domain Description: HNHc Note: nucleases Location: 2471-2618 bp Feature: domain Description: HNHc Note: nucleases Location: 2471-2618 bp Feature: gene Location: 3094-3273 bp Feature: domain Description: antidote_HigA Location: 3139-3274 bp Feature: domain Description: antidote_HigA Location: 3139-3274 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000078.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:078/216, whole genome shotgun sequence (8344 bp)
Overview 1 RT 1: 3466-8275 bp Neighborhood of RT #1 [3466, 8292] Avd_like RVT-DGRs COG5635 pfam03781 Feature: gene Location: 3466-3804 bp Feature: domain Description: Avd_like Location: 3490-3796 bp Feature: domain Description: Avd_like Location: 3490-3796 bp Feature: gene Location: 3829-4140 bp Feature: gene Location: 4184-5218 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4394-5033 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4394-5033 bp Feature: gene Location: 5293-8292 bp Feature: domain Description: COG5635 Location: 6115-7243 bp Feature: domain Description: COG56 35 Location: 6 115-7243 bp Feature: domain Description: pfam03781 Location: 7579-8275 bp Feature: domain Description: pfam03781 Location: 7579-8275 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000158.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:158/216, whole genome shotgun sequence (3020 bp)
Overview 1 RT 1: 446-3020 bp Neighborhood of RT #1 [446, 3019] RVT-GII Feature: gene Location: 446-1465 bp Feature: gene Location: 2389-2613 bp Feature: gene Location: 2678-3019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2963-3020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2963-3020 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: CAILBH010000198.1 uncultured Chlorobiaceae bacterium isolate LJ-3-9m_bin-548 genome assembly, contig: bin-548:198/216, whole genome shotgun sequence (13227 bp)
Overview 1 RT 1: 3-4325 bp Neighborhood of RT #1 [3, 4325] RVT-GII GIIM RVT-GII GIIM PHA02517 Feature: gene Location: 3-170 bp Feature: gene Location: 167-541 bp Feature: gene Location: 538-1779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736-1393 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1693 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1693 bp Feature: gene Location: 1790-1942 bp Feature: gene Location: 2019-2222 bp Feature: gene Location: 2354-3676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2609-3302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2609-3302 bp Feature: domain Description: GIIM Note: maturase Location: 3377-3569 bp Feature: domain Description: GIIM Note: maturase Location: 3377-3569 bp Feature: gene Location: 3821-4099 bp Feature: domain Description: PHA02517 Location: 3824-4091 bp Feature: domain Description: PHA02517 Location: 38 24-4091 bp Feature: gene Location: 4167-4325 bp Sorry, your browser does not support inline SVG.
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