myRT

myRT report for GCA_903879245.1_BCC1285

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Seq: CAIRKU010000024.1 Burkholderia sp. AU31652 isolate BCC1285 genome assembly, contig: NODE_24_length_29052_cov_2.579217_pilon, whole genome shotgun sequence (29052 bp)
Overview 1 RT 1: 2858-8979 bp Neighborhood of RT #1 [2858, 8979] SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf Feature: gene Location: 2858-3727 bp Feature: gene Location: 3841-5001 bp Feature: domain Description: SF2_C_SNF Location: 4441-4837 bp Feature: domain Description: SF2_C_SNF Location: 4441 -4837 bp Feature: gene Location: 5168-6886 bp Feature: RT Description: RVT_N Location: 5225-5462 bp Feature: RT Description: RVT_N Location: 5225-5462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5513-6164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551 3-61 64 bp Feature: domain Description: GIIM Note: maturase Location: 6218-6449 bp Feature: domain Description: GIIM Note: maturase Location: 621 8-6449 bp Feature: domain Description: HNHc Note: nucleases Location: 6683-6839 bp Feature: domain Description: HNHc Note: nucleases Location: 6683-6839 bp Feature: gene Location: 7483-8538 bp Feature: domain Description: DEXHc_Snf Location: 7702-7963 bp Feature: domain Description: DEXHc_Snf Location: 7702-7963 bp Feature: gene Location: 8674-8979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXHc_Snf (cd17919)

Seq: CAIRKU010000911.1 Burkholderia sp. AU31652 isolate BCC1285 genome assembly, contig: NODE_911_length_2447_cov_4.550388_pilon, whole genome shotgun sequence (2447 bp)
Overview 1 RT 1: 1-2437 bp Neighborhood of RT #1 [1, 2445] RVT-Retrons Histone_HNS 2A0115 Feature: gene Location: 1-1029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145-781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145-781 bp Feature: gene Location: 1337-1687 bp Feature: domain Description: Histone_HNS Location: 1379-1616 bp Feature: domain Description: Histone_HNS Location: 1379-1616 bp Feature: gene Location: 1993-2445 bp Feature: domain Description: 2A0115 Location: 2041-2437 bp Feature: domain Description: 2 A0115 Location: 2 041-2 437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Histone_HNS (pfam00816), 2A0115 (TIGR00895)