myRT

myRT report for GCA_903879265.1_BCC1314

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Seq: CAIRKZ010000009.1 Burkholderia sp. AU31652 isolate BCC1314 genome assembly, contig: 9, whole genome shotgun sequence (28049 bp)
Overview 1 RT 1: 5484-9873 bp Neighborhood of RT #1 [5484, 9873] Dcm RVT-DGRs Avd_like Feature: gene Location: 5484-5975 bp Feature: gene Location: 5993-7666 bp Feature: domain Description: Dcm Location: 6044-7622 bp Feature: domain Description: Dcm Location: 6044-7622 bp Feature: gene Location: 7663-9024 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8107-8794 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81 07-8794 bp Feature: gene Location: 9005-9394 bp Feature: domain Description: Avd_like Location: 9032-9338 bp Feature: domain Description: Avd_like Location: 9032-9338 bp Feature: gene Location: 9409-9873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376)

Seq: CAIRKZ010000043.1 Burkholderia sp. AU31652 isolate BCC1314 genome assembly, contig: 43, whole genome shotgun sequence (13614 bp)
Overview 1 RT 1: 5513-8740 bp Neighborhood of RT #1 [5513, 8740] RVT-UG2 COG4889 Feature: gene Location: 5513-5704 bp Feature: gene Location: 5855-6154 bp Feature: gene Location: 6183-7454 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6381-7164 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 6381-7164 bp Feature: gene Location: 7511-7858 bp Feature: domain Description: COG4889 Location: 7640-7775 bp Feature: domain Description: COG4889 Location: 7640-7775 bp Feature: gene Location: 8207-8740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, COG4889 (Predicted helicase )

Seq: CAIRKZ010000053.1 Burkholderia sp. AU31652 isolate BCC1314 genome assembly, contig: 53, whole genome shotgun sequence (11453 bp)
Overview 1 RT 1: 1-5131 bp Neighborhood of RT #1 [1, 5131] RVT-UG8 RVT-UG3 Feature: gene Location: 1-699 bp Feature: gene Location: 937-1182 bp Feature: gene Location: 1188-3230 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1806-2250 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1806-2250 bp Feature: gene Location: 3223-4569 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3679-4153 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3 679-4153 bp Feature: gene Location: 4681-4956 bp Feature: gene Location: 4991-5131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3

Seq: CAIRKZ010000060.1 Burkholderia sp. AU31652 isolate BCC1314 genome assembly, contig: 60, whole genome shotgun sequence (10920 bp)
Overview 1 RT 1: 2801-8941 bp Neighborhood of RT #1 [2801, 8997] ilvH PRK05479 RVT_N RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 2801-3349 bp Feature: domain Description: ilvH Location: 2861-3338 bp Feature: domain Description: ilvH Location: 2861-3338 bp Feature: gene Location: 3445-4461 bp Feature: domain Description: PRK05479 Location: 3448-4429 bp Feature: domain Description: PRK054 79 Location: 34 4 8-4 4 29 bp Feature: gene Location: 5642-7354 bp Feature: domain Description: RVT_N Location: 5699-5942 bp Feature: domain Description: RVT_N Location: 5699-594 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5987-6635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5987-6635 bp Feature: domain Description: GIIM Note: maturase Location: 6686-6920 bp Feature: domain Description: GIIM Note: maturase Location: 6686-6920 bp Feature: domain Description: HNHc Note: nucleases Location: 7151-7304 bp Feature: domain Description: HNHc Note: nucleases Location: 7151-7304 bp Feature: gene Location: 7471-8115 bp Feature: domain Description: PRK05305 Location: 7495-8107 bp Feature: domain Description: PRK05305 Location: 74 95-8107 bp Feature: gene Location: 8131-8997 bp Feature: domain Description: PssA Location: 8263-8941 bp Feature: domain Description: PssA Location: 8263-894 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)

Seq: CAIRKZ010000068.1 Burkholderia sp. AU31652 isolate BCC1314 genome assembly, contig: 68, whole genome shotgun sequence (9749 bp)
Overview 1 RT 1: 1340-6789 bp Neighborhood of RT #1 [1340, 6794] UvrD RVT-GII GIIM DUF4400 Feature: gene Location: 1340-3061 bp Feature: domain Description: UvrD Location: 1352-3041 bp Feature: domain Description: UvrD Location: 135 2-3041 bp Feature: gene Location: 3079-3972 bp Feature: gene Location: 4190-5557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4517-5138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45 17-5 138 bp Feature: domain Description: GIIM Note: maturase Location: 5189-5393 bp Feature: domain Description: GIIM Note: maturase Location: 5 189-5 393 bp Feature: gene Location: 5573-5785 bp Feature: gene Location: 6189-6794 bp Feature: domain Description: DUF4400 Location: 6297-6789 bp Feature: domain Description: DUF4400 Location: 6297-6789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD (COG0210), RVT-GII, GIIM (pfam08388), DUF4400 (pfam14348)

Seq: CAIRKZ010000078.1 Burkholderia sp. AU31652 isolate BCC1314 genome assembly, contig: 78, whole genome shotgun sequence (9282 bp)
Overview 1 RT 1: 1-3969 bp Neighborhood of RT #1 [1, 3969] SRAP RVT-GII Feature: gene Location: 1-375 bp Feature: domain Description: SRAP Location: 10-340 bp Feature: domain Description: SRAP Location: 10-340 bp Feature: gene Location: 528-2060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 939-1629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 939-16 29 bp Feature: gene Location: 2196-2363 bp Feature: gene Location: 2677-3969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-GII