myRT

myRT report for GCA_903879315.1_BCC1321

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Seq: CAIRLI010000015.1 Burkholderia sp. AU31652 isolate BCC1321 genome assembly, contig: 15, whole genome shotgun sequence (21805 bp)
Overview 1 RT 1: 2-7393 bp Neighborhood of RT #1 [2, 7398] Cas3''_I N6_N4_Mtase RVT-UG14 UvrD UvrD PRK13752 Feature: gene Location: 2-211 bp Feature: gene Location: 213-3149 bp Feature: domain Description: Cas3''_I Location: 363-453 bp Feature: domain Description: Cas3''_I Location: 363-453 bp Feature: domain Description: N6_N4_Mtase Location: 774-1752 bp Feature: domain Description: N6_N4_Mtase Location: 774-1 752 bp Feature: gene Location: 3165-4715 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 3588-4083 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 3588-4083 bp Feature: gene Location: 4724-6802 bp Feature: domain Description: UvrD Location: 5423-6530 bp Feature: domain Description: UvrD Location: 5423-6530 bp Feature: domain Description: UvrD Location: 6545-6785 bp Feature: domain Description: UvrD Location: 6545-6785 bp Feature: gene Location: 6964-7398 bp Feature: domain Description: PRK13752 Location: 6967-7393 bp Feature: domain Description: PRK1 3752 Location: 6967-7393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas3''_I (cd10013), N6_N4_Mtase (pfam01555), RVT-UG14, UvrD (COG0210), PRK13752 (mercuric resistance operon transcriptional regulator MerR)

Seq: CAIRLI010000034.1 Burkholderia sp. AU31652 isolate BCC1321 genome assembly, contig: 34, whole genome shotgun sequence (12647 bp)
Overview 1 RT 1: 4337-10070 bp Neighborhood of RT #1 [4337, 10070] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 4337-4642 bp Feature: gene Location: 4778-5833 bp Feature: domain Description: DEXHc_Snf Location: 4997-5258 bp Feature: domain Description: DEXHc_Snf Location: 4997-52 58 bp Feature: gene Location: 6430-8148 bp Feature: domain Description: RVT_N Location: 6487-6724 bp Feature: domain Description: RVT_N Location: 6487-672 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6775-7426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6775-742 6 bp Feature: domain Description: GIIM Note: maturase Location: 7480-7711 bp Feature: domain Description: GIIM Note: maturase Location: 7480-7711 bp Feature: domain Description: HNHc Note: nucleases Location: 7945-8101 bp Feature: domain Description: HNHc Note: nucleases Location: 7945-8101 bp Feature: gene Location: 8315-9475 bp Feature: domain Description: SF2_C_SNF Location: 8933-9311 bp Feature: domain Description: SF2 _C_SNF Location: 8933-9311 bp Feature: gene Location: 9534-10070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXHc_Snf (cd17919), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SF2_C_SNF (cd18793)