myRT

myRT report for GCA_903931095.1_4278_06

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Seq: CAIZAZ010000011.1 Salmonella enterica isolate 4278_06 genome assembly, contig: NODE_4_length_360442_cov_3.33937, whole genome shotgun sequence (360442 bp)
Overview 1 RT 1: 59480-65370 bp Neighborhood of RT #1 [59480, 65372] HTH_Hin_like HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 59480-59611 bp Feature: domain Description: HTH_Hin_like Location: 59486-59591 bp Feature: domain Description: HTH_Hin_like Location: 59486-59591 bp Feature: gene Location: 59997-60434 bp Feature: domain Description: HTH_Tnp_1 Location: 60012-60129 bp Feature: domain Description: HTH_Tnp_1 Location: 6001 2-601 29 bp Feature: gene Location: 60484-62115 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60799-61396 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60799-61 396 bp Feature: domain Description: TIR_2 Location: 61720-62080 bp Feature: domain Description: TIR_2 Location: 61 720-62080 bp Feature: gene Location: 62704-65037 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62794-62902 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62794-62902 bp Feature: domain Description: COG3378 Location: 63520-65029 bp Feature: domain Description: COG3378 Location: 63520-65029 bp Feature: gene Location: 65052-65372 bp Feature: domain Description: DUF5375 Location: 65055-65370 bp Feature: domain Description: DUF5375 Location: 65055-65370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Hin_like (cd00569), HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)