myRT

myRT report for GCA_903931115.1_3332_18

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Seq: CAIZBA010000002.1 Salmonella enterica isolate 3332_18 genome assembly, contig: contig00002, whole genome shotgun sequence (627442 bp)
Overview 1 RT 1: 57881-62121 bp Neighborhood of RT #1 [57881, 62204] DUF4756 RVT-Retrons HTH_23 DDE_3 Feature: gene Location: 57881-58282 bp Feature: domain Description: DUF4756 Location: 57884-58280 bp Feature: domain Description: DUF4756 Location: 57884-58280 bp Feature: gene Location: 58801-59760 bp Feature: gene Location: 60077-61030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60233-60782 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60233-60782 bp Feature: gene Location: 61173-61577 bp Feature: domain Description: HTH_23 Location: 61266-61392 bp Feature: domain Description: HTH_23 Location: 61 266-61 392 bp Feature: gene Location: 61584-62204 bp Feature: domain Description: DDE_3 Location: 61704-62121 bp Feature: domain Description: DDE_3 Location: 61 704-621 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4756 (pfam15948), RVT-Retrons, HTH_23 (pfam13384), DDE_3 (pfam13358)

Seq: CAIZBA010000010.1 Salmonella enterica isolate 3332_18 genome assembly, contig: contig00010, whole genome shotgun sequence (113089 bp)
Overview 1 RT 1: 1186-3621 bp Neighborhood of RT #1 [1186, 3621] InsQ RVT-GII RVT-GII Feature: gene Location: 1186-1362 bp Feature: domain Description: InsQ Location: 1192-1246 bp Feature: domain Description: InsQ Location: 1192 -12 46 bp Feature: gene Location: 1469-1609 bp Feature: gene Location: 1705-2370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2023-2155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 3-2 155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158-2356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 158-2 356 bp Feature: gene Location: 2377-2640 bp Feature: gene Location: 3199-3621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII