myRT

myRT report for GCA_903931135.1_2742_14

Download annotations/find similar RTs

Seq: CAIZBG010000038.1 Salmonella enterica isolate 2742_14 genome assembly, contig: NODE_17_length_108548_cov_3.35734, whole genome shotgun sequence (108548 bp)
Overview 1 RT 1: 12980-18870 bp Neighborhood of RT #1 [12980, 18872] HTH_Hin_like HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 12980-13111 bp Feature: domain Description: HTH_Hin_like Location: 12986-13091 bp Feature: domain Description: HTH_Hin_like Location: 1 2986-1 3091 bp Feature: gene Location: 13497-13934 bp Feature: domain Description: HTH_Tnp_1 Location: 13512-13629 bp Feature: domain Description: HTH_Tnp_1 Location: 1 351 2-1 3629 bp Feature: gene Location: 13984-15615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14299-14896 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4299-1 4896 bp Feature: domain Description: TIR_2 Location: 15220-15580 bp Feature: domain Description: TIR_2 Location: 1 5220-1 5580 bp Feature: gene Location: 16204-18537 bp Feature: domain Description: Prim_Zn_Ribbon Location: 16294-16402 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 6294-1 6402 bp Feature: domain Description: COG3378 Location: 17020-18529 bp Feature: domain Description: COG3378 Location: 1 7020-1 8529 bp Feature: gene Location: 18552-18872 bp Feature: domain Description: DUF5375 Location: 18555-18870 bp Feature: domain Description: DUF5375 Location: 1 8555-1 8870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Hin_like (cd00569), HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)