myRT

myRT report for GCA_903932095.1_ROAR-344

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Seq: CAIZEZ010000012.1 Escherichia fergusonii strain O134:Unknown / ND / 10187 (ST Warwick) / fergusonii genome assembly, contig: NODE_12_length_139825_cov_38.262825, whole genome shotgun sequence (139825 bp)
Overview 1 RT 1: 124934-128814 bp Neighborhood of RT #1 [124934, 128819] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 124934-125650 bp Feature: domain Description: rph Location: 124937-125645 bp Feature: domain Description: rph Location: 1 24937-1 25645 bp Feature: gene Location: 125701-126357 bp Feature: domain Description: pyrE Location: 125719-126352 bp Feature: domain Description: pyrE Location: 1 2571 9-1 26352 bp Feature: gene Location: 126655-127614 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126790-127339 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 26790-1 27339 bp Feature: gene Location: 127658-128254 bp Feature: domain Description: slmA Location: 127664-128240 bp Feature: domain Description: slmA Location: 1 27664-1 28240 bp Feature: gene Location: 128361-128819 bp Feature: domain Description: dut Location: 128367-128814 bp Feature: domain Description: dut Location: 1 28367-1 2881 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: CAIZEZ010000027.1 Escherichia fergusonii strain O134:Unknown / ND / 10187 (ST Warwick) / fergusonii genome assembly, contig: NODE_27_length_46282_cov_30.702944, whole genome shotgun sequence (46282 bp)
Overview 1 RT 1: 21817-27517 bp Neighborhood of RT #1 [21817, 27517] SmpB PRK09692 RVT-Retrons ABC_Iron-Siderophores_B12_Hemin ABC_Iron-Siderophores_B12_Hemin Feature: gene Location: 21817-22299 bp Feature: domain Description: SmpB Location: 21847-22294 bp Feature: domain Description: SmpB Location: 2 1847-2 2 2 94 bp Feature: gene Location: 23042-24271 bp Feature: domain Description: PRK09692 Location: 23045-24248 bp Feature: domain Description: PRK09692 Location: 2 3045-2 42 48 bp Feature: gene Location: 24759-25718 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24885-25452 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 4885-2 5452 bp Feature: gene Location: 25720-27042 bp Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 25735-25873 bp Feature: domain Description: ABC_Iron-Siderophores_B12 _Hemin Location: 2 5735-2 5873 bp Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 26266-26455 bp Feature: domain Description: ABC_Iron-Siderophores_B12 _Hemin Location: 2 62 66-2 6455 bp Feature: gene Location: 27167-27517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-Retrons, ABC_Iron-Siderophores_B12_Hemin (cd03214)