myRT

myRT report for GCA_903968575.1_ArsBee_CH

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Seq: CAJCFU010000049.1 Arsenophonus endosymbiont of Apis mellifera isolate ArsBee_CH genome assembly, contig: NODE_26924_length_264463_cov_184.107, whole genome shotgun sequence (264463 bp)
Overview 1 RT 1: 68726-74441 bp 2 RT 2: 231922-235768 bp Neighborhood of RT #1 [68726, 74506] COG2865 RVT-UG2 RVT-UG2 fis PRK10415 Neighborhood of RT #2 [231922, 235854] PRK09010 RVT-Retrons AcrR Feature: gene Location: 68726-68911 bp Feature: gene Location: 69184-70755 bp Feature: domain Description: COG2865 Location: 69223-69934 bp Feature: domain Description: COG2865 Location: 69223-69934 bp Feature: gene Location: 71009-71626 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 71024-71333 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 71 024-71 333 bp Feature: gene Location: 71910-72404 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 72216-72363 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7221 6-72363 bp Feature: gene Location: 73131-73265 bp Feature: domain Description: fis Location: 73134-73263 bp Feature: domain Description: fis Location: 731 34-73263 bp Feature: gene Location: 73394-74506 bp Feature: domain Description: PRK10415 Location: 73484-74441 bp Feature: domain Description: PRK1 041 5 Location: 73484-74441 bp Feature: gene Location: 231922-232467 bp Feature: domain Description: PRK09010 Location: 231925-232465 bp Feature: domain Description: PRK0901 0 Location: 231 925-232465 bp Feature: gene Location: 233045-233236 bp Feature: gene Location: 233270-234436 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 233408-233966 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 233408-233966 bp Feature: gene Location: 234872-235153 bp Feature: gene Location: 235258-235854 bp Feature: domain Description: AcrR Location: 235264-235768 bp Feature: domain Description: AcrR Location: 235264-235768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG2, fis (PRK00430), PRK10415 (tRNA-dihydrouridine synthase B; Provisional), PRK09010 (single-stranded DNA-binding protein; Provisional), RVT-Retrons, AcrR (COG1309)

Seq: CAJCFU010000060.1 Arsenophonus endosymbiont of Apis mellifera isolate ArsBee_CH genome assembly, contig: NODE_26960_length_310113_cov_169.443, whole genome shotgun sequence (310113 bp)
Overview 1 RT 1: 289893-294495 bp Neighborhood of RT #1 [289893, 294495] PRK09678 DUF4917 RVT-Retrons HEPN_LA2681 Feature: gene Location: 289893-290081 bp Feature: domain Description: PRK09678 Location: 289896-290073 bp Feature: domain Description: PRK09678 Location: 2 89896-2 90073 bp Feature: gene Location: 290156-291232 bp Feature: domain Description: DUF4917 Location: 290288-291224 bp Feature: domain Description: DUF4917 Location: 2 902 88-2 912 2 4 bp Feature: gene Location: 291665-293440 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 291809-292433 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 91809-2 92 433 bp Feature: gene Location: 293800-294018 bp Feature: domain Description: HEPN_LA2681 Location: 293824-293953 bp Feature: domain Description: HEPN_LA2 681 Location: 2 9382 4-2 93953 bp Feature: gene Location: 294352-294495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), DUF4917 (pfam16263), RVT-Retrons, HEPN_LA2681 (pfam18733)