myRT

myRT report for GCA_903970215.1_BOG_194

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Seq: CAJCHX010000167.1 Acidobacteriaceae bacterium isolate BOG_194 genome assembly, contig: k141_7708185, whole genome shotgun sequence (4714 bp)
Overview 1 RT 1: 157-3317 bp Neighborhood of RT #1 [157, 3409] RVT-GII Clp_N Clp_N Feature: gene Location: 157-384 bp Feature: gene Location: 1626-2099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1632-2025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 632-2025 bp Feature: gene Location: 2419-2940 bp Feature: gene Location: 3011-3409 bp Feature: domain Description: Clp_N Location: 3020-3095 bp Feature: domain Description: Clp_N Location: 3020-3095 bp Feature: domain Description: Clp_N Location: 3176-3317 bp Feature: domain Description: Clp_N Location: 31 76-331 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Clp_N (pfam02861)

Seq: CAJCHX010000298.1 Acidobacteriaceae bacterium isolate BOG_194 genome assembly, contig: k141_6952126, whole genome shotgun sequence (15479 bp)
Overview 1 RT 1: 12447-15299 bp Neighborhood of RT #1 [12447, 15299] DDE_Tnp_1 COG5421 RVT-GII GIIM Feature: gene Location: 12447-12950 bp Feature: domain Description: DDE_Tnp_1 Location: 12591-12774 bp Feature: domain Description: DDE_Tnp_1 Location: 12 591-12 774 bp Feature: gene Location: 13061-13474 bp Feature: domain Description: COG5421 Location: 13076-13385 bp Feature: domain Description: COG542 1 Location: 13076-13385 bp Feature: gene Location: 13593-15164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14043-14733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14043-14733 bp Feature: domain Description: GIIM Note: maturase Location: 14808-15027 bp Feature: domain Description: GIIM Note: maturase Location: 14808-1502 7 bp Feature: gene Location: 14544-15299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), COG5421 (Transposase ), RVT-GII, GIIM (pfam08388)