myRT

myRT report for GCA_903970295.1_BOG_286

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Seq: CAJCHQ010000174.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_4877300, whole genome shotgun sequence (3405 bp)
Overview 1 RT 1: 458-3105 bp Neighborhood of RT #1 [458, 3105] DUF4379 DUF4379 DUF4379 RVT_N RVT-GII GIIM Feature: gene Location: 458-1012 bp Feature: domain Description: DUF4379 Location: 464-569 bp Feature: domain Description: DUF4379 Location: 464-569 bp Feature: domain Description: DUF4379 Location: 617-785 bp Feature: domain Description: DUF4379 Location: 61 7-785 bp Feature: domain Description: DUF4379 Location: 833-995 bp Feature: domain Description: DUF4379 Location: 833-995 bp Feature: gene Location: 1104-2606 bp Feature: domain Description: RVT_N Location: 1161-1404 bp Feature: domain Description: RVT_N Location: 1 1 61 -1 404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1455-2064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 455-2064 bp Feature: domain Description: GIIM Note: maturase Location: 2124-2349 bp Feature: domain Description: GIIM Note: maturase Location: 21 24-2349 bp Feature: gene Location: 2695-2835 bp Feature: gene Location: 2965-3105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4379 (pfam14311), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAJCHQ010000261.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_11526096, whole genome shotgun sequence (6474 bp)
Overview 1 RT 1: 304-6472 bp Neighborhood of RT #1 [304, 6472] INT_Rci_Hp1_C RVT-UG3 RVT-UG8 Feature: gene Location: 304-1377 bp Feature: domain Description: INT_Rci_Hp1_C Location: 790-1342 bp Feature: domain Description: INT_Rci_Hp1_C Location: 790-1342 bp Feature: gene Location: 1554-3062 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2073-2571 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 073-2 571 bp Feature: gene Location: 3059-5050 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3578-4025 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3578-402 5 bp Feature: gene Location: 5186-5389 bp Feature: gene Location: 5402-6472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT-UG3, RVT-UG8

Seq: CAJCHQ010000463.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_2279210, whole genome shotgun sequence (6043 bp)
Overview 1 RT 1: 807-4545 bp Neighborhood of RT #1 [807, 4545] RVT-Retrons Feature: gene Location: 807-1673 bp Feature: gene Location: 1690-1845 bp Feature: gene Location: 1946-2338 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2000-2279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2000-2279 bp Feature: gene Location: 2546-3904 bp Feature: gene Location: 3958-4545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CAJCHQ010000599.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_12703856, whole genome shotgun sequence (11875 bp)
Overview 1 RT 1: 3079-8901 bp Neighborhood of RT #1 [3079, 9059] RVT-GII GIIM RVT-GII ZnMc_MMP_like TPR TPR Feature: gene Location: 3079-3276 bp Feature: gene Location: 3283-3594 bp Feature: gene Location: 3605-4873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3809-4469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3809-4 4 69 bp Feature: domain Description: GIIM Note: maturase Location: 4553-4775 bp Feature: domain Description: GIIM Note: maturase Location: 4 553-4 775 bp Feature: gene Location: 4900-5094 bp Feature: gene Location: 5143-5340 bp Feature: gene Location: 5477-6403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5894-6398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5894 -6398 bp Feature: gene Location: 6446-7624 bp Feature: domain Description: ZnMc_MMP_like Location: 7118-7433 bp Feature: domain Description: ZnMc_MMP_like Location: 7118-74 33 bp Feature: gene Location: 7887-9059 bp Feature: domain Description: TPR Location: 8214-8535 bp Feature: domain Description: TPR Location: 8214 -8535 bp Feature: domain Description: TPR Location: 8574-8901 bp Feature: domain Description: TPR Location: 8574 -8901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ZnMc_MMP_like (cd04268), TPR (smart00028)

Seq: CAJCHQ010000767.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_12851795, whole genome shotgun sequence (6473 bp)
Overview 1 RT 1: 4275-6358 bp Neighborhood of RT #1 [4275, 6450] RVT_N RVT-GII Feature: gene Location: 4275-4508 bp Feature: gene Location: 4734-4988 bp Feature: gene Location: 5569-6450 bp Feature: domain Description: RVT_N Location: 5623-5869 bp Feature: domain Description: RVT_N Location: 5 623-5 869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5917-6358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 917-635 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CAJCHQ010000770.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_631534, whole genome shotgun sequence (3744 bp)
Overview 1 RT 1: 3-2115 bp Neighborhood of RT #1 [3, 2153] RVT-GII GIIM Rhs_assc_core Feature: gene Location: 3-1238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342-993 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1227 bp Feature: domain Description: GIIM Note: maturase Location: 1077-1227 bp Feature: gene Location: 1237-1587 bp Feature: gene Location: 1668-2153 bp Feature: domain Description: Rhs_assc_core Location: 1932-2115 bp Feature: domain Description: Rhs_assc_core Location: 1932-2115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Rhs_assc_core (TIGR03696)

Seq: CAJCHQ010000844.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_14864830, whole genome shotgun sequence (6767 bp)
Overview 1 RT 1: 3-3694 bp Neighborhood of RT #1 [3, 3708] RVT_N RVT-GII YkfC HNH xerC Feature: gene Location: 3-140 bp Feature: gene Location: 537-2195 bp Feature: domain Description: RVT_N Location: 582-819 bp Feature: domain Description: RVT_N Location: 582-819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870-1506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87 0-1506 bp Feature: domain Description: YkfC Location: 1635-1860 bp Feature: domain Description: YkfC Location: 1635-1860 bp Feature: domain Description: HNH Note: nucleases Location: 2043-2178 bp Feature: domain Description: HNH Note: nucleases Location: 2043-217 8 bp Feature: gene Location: 2210-2446 bp Feature: gene Location: 2512-3708 bp Feature: domain Description: xerC Location: 2698-3694 bp Feature: domain Description: xerC Location: 2698-3694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), xerC (PRK01287)

Seq: CAJCHQ010000947.1 Bryobacterales bacterium isolate BOG_286 genome assembly, contig: k141_2732783, whole genome shotgun sequence (3028 bp)
Overview 1 RT 1: 403-3026 bp Neighborhood of RT #1 [403, 3026] RVT_N RVT-GII GIIM Feature: gene Location: 403-582 bp Feature: gene Location: 664-792 bp Feature: gene Location: 1250-2722 bp Feature: domain Description: RVT_N Location: 1304-1550 bp Feature: domain Description: RVT_N Location: 1304-1550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1598-2204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1598 -2204 bp Feature: domain Description: GIIM Note: maturase Location: 2264-2492 bp Feature: domain Description: GIIM Note: maturase Location: 2264-2492 bp Feature: gene Location: 2862-3026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)