myRT

myRT report for GCA_903970325.1_BOG_genome_mining.187

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Seq: CAJCIK010000057.1 Verrucomicrobia bacterium isolate BOG_genome_mining.187 genome assembly, contig: k141_992733, whole genome shotgun sequence (3482 bp)
Overview 1 RT 1: 123-3481 bp Neighborhood of RT #1 [123, 3480] RVT-GII GIIM HpnN HpnN Feature: gene Location: 123-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 -1 071 bp Feature: domain Description: GIIM Note: maturase Location: 1164-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 64-1 371 bp Feature: gene Location: 2245-3480 bp Feature: domain Description: HpnN Location: 2278-2683 bp Feature: domain Description: HpnN Location: 2278-2683 bp Feature: domain Description: HpnN Location: 2953-3481 bp Feature: domain Description: HpnN Location: 2953-3481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HpnN (TIGR03480)

Seq: CAJCIK010000469.1 Verrucomicrobia bacterium isolate BOG_genome_mining.187 genome assembly, contig: k141_9835584, whole genome shotgun sequence (2577 bp)
Overview 1 RT 1: 2-1750 bp Neighborhood of RT #1 [2, 1905] STKc_PknB_like RVT-GII GIIM Feature: gene Location: 2-520 bp Feature: domain Description: STKc_PknB_like Location: 47-497 bp Feature: domain Description: STKc_PknB_like Location: 47-497 bp Feature: gene Location: 676-1905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868-1483 bp Feature: domain Description: GIIM Note: maturase Location: 1543-1750 bp Feature: domain Description: GIIM Note: maturase Location: 1543-1750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-GII, GIIM (pfam08388)

Seq: CAJCIK010000735.1 Verrucomicrobia bacterium isolate BOG_genome_mining.187 genome assembly, contig: k141_6282202, whole genome shotgun sequence (2617 bp)
Overview 1 RT 1: 1-2613 bp Neighborhood of RT #1 [1, 2615] YiaAB RVT-GII GIIM carb_red_PTCR-like_SDR_c SDR_c2 Feature: gene Location: 1-333 bp Feature: domain Description: YiaAB Location: 247-334 bp Feature: domain Description: YiaAB Location: 247-3 3 4 bp Feature: gene Location: 827-2176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1145-1778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1145-1778 bp Feature: domain Description: GIIM Note: maturase Location: 1868-2078 bp Feature: domain Description: GIIM Note: maturase Location: 1868-2078 bp Feature: gene Location: 2301-2615 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 2319-2508 bp Feature: domain Description: carb_red_PTCR-like_SDR_c Location: 23 19-2508 bp Feature: domain Description: SDR_c2 Location: 2511-2613 bp Feature: domain Description: SDR_c2 Location: 2511-2613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiaAB (pfam05360), carb_red_PTCR-like_SDR_c (cd05324), SDR_c2 (cd05370), RVT-GII, GIIM (pfam08388)