myRT

myRT report for GCA_903970335.1_BOG_genome_mining.178

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Seq: CAJCII010000067.1 Bacteroidetes bacterium isolate BOG_genome_mining.178 genome assembly, contig: k141_9633281, whole genome shotgun sequence (12851 bp)
Overview 1 RT 1: 2553-8259 bp Neighborhood of RT #1 [2553, 8339] DZR FHA STKc_PknB_like RVT-DGRs Avd_like YfmG Feature: gene Location: 2553-4271 bp Feature: domain Description: DZR Location: 2568-2622 bp Feature: domain Description: DZR Location: 2568-2622 bp Feature: domain Description: FHA Location: 3615-3843 bp Feature: domain Description: FHA Location: 361 5-3843 bp Feature: gene Location: 4289-6430 bp Feature: domain Description: STKc_PknB_like Location: 4382-5177 bp Feature: domain Description: STKc_PknB_like Location: 4382-51 77 bp Feature: gene Location: 6643-7683 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6850-7489 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6850-7489 bp Feature: gene Location: 7715-8029 bp Feature: domain Description: Avd_like Location: 7721-8018 bp Feature: domain Description: Avd_like Location: 7721 -801 8 bp Feature: gene Location: 8142-8339 bp Feature: domain Description: YfmG Location: 8148-8259 bp Feature: domain Description: YfmG Location: 81 48-8259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DZR (pfam12773), FHA (smart00240), STKc_PknB_like (cd14014), RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: CAJCII010000080.1 Bacteroidetes bacterium isolate BOG_genome_mining.178 genome assembly, contig: k141_9701986, whole genome shotgun sequence (21902 bp)
Overview 1 RT 1: 2-3154 bp Neighborhood of RT #1 [2, 3168] RVT-GII ManA ManA COG1912 Feature: gene Location: 2-262 bp Feature: gene Location: 450-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-918 bp Feature: gene Location: 1277-2221 bp Feature: domain Description: ManA Location: 1283-1679 bp Feature: domain Description: ManA Location: 12 83-1679 bp Feature: domain Description: ManA Location: 1733-2183 bp Feature: domain Description: ManA Location: 1733-2 183 bp Feature: gene Location: 2218-3168 bp Feature: domain Description: COG1912 Location: 2377-3154 bp Feature: domain Description: COG1912 Location: 2 377-3154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ManA (COG1482), COG1912 (S-adenosylmethionine hydrolase (SAM-hydroxide adenosyltransferase) )

Seq: CAJCII010000209.1 Bacteroidetes bacterium isolate BOG_genome_mining.178 genome assembly, contig: k141_12123075, whole genome shotgun sequence (13056 bp)
Overview 1 RT 1: 6811-12013 bp Neighborhood of RT #1 [6811, 12013] PRK09906 HEAT_2 RVT-GII GIIM Feature: gene Location: 6811-7842 bp Feature: domain Description: PRK09906 Location: 6946-7828 bp Feature: domain Description: PRK09906 Location: 6946-7828 bp Feature: gene Location: 8101-8718 bp Feature: domain Description: HEAT_2 Location: 8425-8593 bp Feature: domain Description: HEAT_2 Location: 8425-8593 bp Feature: gene Location: 9420-10730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9708-10356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9708-103 56 bp Feature: domain Description: GIIM Note: maturase Location: 10425-10650 bp Feature: domain Description: GIIM Note: maturase Location: 10425-10650 bp Feature: gene Location: 11070-11204 bp Feature: gene Location: 11216-12013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09906 (DNA-binding transcriptional regulator HcaR; Provisional), HEAT_2 (pfam13646), RVT-GII, GIIM (pfam08388)