myRT

myRT report for GCA_903970405.1_BOG_genome_mining.201

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Seq: CAJCIT010000086.1 Acidobacteriaceae bacterium isolate BOG_genome_mining.201 genome assembly, contig: k141_7665061, whole genome shotgun sequence (5875 bp)
Overview 1 RT 1: 87-2510 bp Neighborhood of RT #1 [87, 2620] RVT-GII GIIM OmpH Feature: gene Location: 87-1502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459-1 077 bp Feature: domain Description: GIIM Note: maturase Location: 1125-1356 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 25-1 356 bp Feature: gene Location: 1531-1812 bp Feature: gene Location: 2006-2620 bp Feature: domain Description: OmpH Location: 2087-2510 bp Feature: domain Description: OmpH Location: 2087-251 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpH (smart00935), RVT-GII, GIIM (pfam08388)

Seq: CAJCIT010000165.1 Acidobacteriaceae bacterium isolate BOG_genome_mining.201 genome assembly, contig: k141_4041475, whole genome shotgun sequence (9492 bp)
Overview 1 RT 1: 4550-8015 bp Neighborhood of RT #1 [4550, 8015] DUF4065 RVT-GII GIIM Feature: gene Location: 4550-5227 bp Feature: domain Description: DUF4065 Location: 4670-4994 bp Feature: domain Description: DUF4065 Location: 4670-4994 bp Feature: gene Location: 5425-5613 bp Feature: gene Location: 5802-7187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6138-6756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6138-6756 bp Feature: domain Description: GIIM Note: maturase Location: 6804-7032 bp Feature: domain Description: GIIM Note: maturase Location: 6804-7032 bp Feature: gene Location: 7406-7666 bp Feature: gene Location: 7725-8015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4065 (pfam13274), RVT-GII, GIIM (pfam08388)

Seq: CAJCIT010000218.1 Acidobacteriaceae bacterium isolate BOG_genome_mining.201 genome assembly, contig: k141_3253785, whole genome shotgun sequence (4545 bp)
Overview 1 RT 1: 1-4544 bp Neighborhood of RT #1 [1, 4544] COG5635 YfmG Avd_like RVT-DGRs Feature: gene Location: 1-2697 bp Feature: domain Description: COG5635 Location: 535-1675 bp Feature: domain Description: COG563 5 Location: 53 5-1675 bp Feature: domain Description: YfmG Location: 1975-2680 bp Feature: domain Description: YfmG Location: 1975-2680 bp Feature: gene Location: 2788-3150 bp Feature: domain Description: Avd_like Location: 2815-3121 bp Feature: domain Description: Avd_like Location: 2815-3 121 bp Feature: gene Location: 3147-4295 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3357-3996 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 3 57-3 996 bp Feature: gene Location: 4338-4544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: CAJCIT010000315.1 Acidobacteriaceae bacterium isolate BOG_genome_mining.201 genome assembly, contig: k141_5620682, whole genome shotgun sequence (3357 bp)
Overview 1 RT 1: 2-3260 bp Neighborhood of RT #1 [2, 3304] IS5 RVT_N RVT-GII GIIM IS5 Feature: gene Location: 2-757 bp Feature: domain Description: IS5 Location: 191-587 bp Feature: domain Description: IS5 Location: 191-587 bp Feature: gene Location: 684-2156 bp Feature: RT Description: RVT_N Location: 759-999 bp Feature: RT Description: RVT_N Location: 759-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047-1689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 7-1689 bp Feature: domain Description: GIIM Note: maturase Location: 1740-1974 bp Feature: domain Description: GIIM Note: maturase Location: 174 0-1974 bp Feature: gene Location: 2197-2430 bp Feature: gene Location: 2714-3304 bp Feature: domain Description: IS5 Location: 2897-3260 bp Feature: domain Description: IS5 Location: 2897-3260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAJCIT010000316.1 Acidobacteriaceae bacterium isolate BOG_genome_mining.201 genome assembly, contig: k141_3746512, whole genome shotgun sequence (3989 bp)
Overview 1 RT 1: 549-3530 bp Neighborhood of RT #1 [549, 3565] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 549-1064 bp Feature: gene Location: 1095-2243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146-175 2 bp Feature: domain Description: GIIM Note: maturase Location: 1818-2049 bp Feature: domain Description: GIIM Note: maturase Location: 1818-2049 bp Feature: gene Location: 2388-3212 bp Feature: domain Description: PHA02517 Location: 2541-3180 bp Feature: domain Description: PHA025 17 Location: 25 41-3180 bp Feature: gene Location: 3209-3565 bp Feature: domain Description: InsE Location: 3263-3530 bp Feature: domain Description: InsE Location: 3263-35 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)