myRT

myRT report for GCA_903970475.1_BOG_genome_mining.200

Download annotations/find similar RTs

Seq: CAJCIQ010000024.1 Beijerinckiaceae bacterium isolate BOG_genome_mining.200 genome assembly, contig: k141_999429, whole genome shotgun sequence (26633 bp)
Overview 1 RT 1: 322-1372 bp Neighborhood of RT #1 [322, 1515] RVT-GII PIN_Sll0205-like Feature: gene Location: 322-747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661 -745 bp Feature: gene Location: 758-979 bp Feature: gene Location: 1036-1515 bp Feature: domain Description: PIN_Sll0205-like Location: 1057-1372 bp Feature: domain Description: PIN_Sll0205-like Location: 1 057-1 372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PIN_Sll0205-like (cd09872)

Seq: CAJCIQ010000157.1 Beijerinckiaceae bacterium isolate BOG_genome_mining.200 genome assembly, contig: k141_13623896, whole genome shotgun sequence (15067 bp)
Overview 1 RT 1: 6055-11425 bp Neighborhood of RT #1 [6055, 11425] ADOP RVT-GII GIIM Feature: gene Location: 6055-8433 bp Feature: domain Description: ADOP Location: 6073-8431 bp Feature: domain Description: ADOP Location: 6073-8431 bp Feature: gene Location: 8612-8791 bp Feature: gene Location: 9376-10689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9622-10240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962 2 -102 40 bp Feature: domain Description: GIIM Note: maturase Location: 10291-10501 bp Feature: domain Description: GIIM Note: maturase Location: 102 91-10501 bp Feature: gene Location: 10803-10982 bp Feature: gene Location: 11234-11425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADOP (TIGR03434), RVT-GII, GIIM (pfam08388)

Seq: CAJCIQ010000162.1 Beijerinckiaceae bacterium isolate BOG_genome_mining.200 genome assembly, contig: k141_8976366, whole genome shotgun sequence (13985 bp)
Overview 1 RT 1: 2-4721 bp Neighborhood of RT #1 [2, 4969] RVT-GII GIIM Laminin_G_3 PKD CHU_C Glyco_tranf_2_5 Feature: gene Location: 2-1189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-698 bp Feature: domain Description: GIIM Note: maturase Location: 752-956 bp Feature: domain Description: GIIM Note: maturase Location: 752-956 bp Feature: gene Location: 1293-4034 bp Feature: domain Description: Laminin_G_3 Location: 1770-2022 bp Feature: domain Description: Laminin_G_3 Location: 1770-2022 bp Feature: domain Description: PKD Location: 2094-2292 bp Feature: domain Description: PKD Location: 2094-2292 bp Feature: domain Description: CHU_C Location: 3765-3978 bp Feature: domain Description: CHU_C Location: 3 765-3 978 bp Feature: gene Location: 4073-4969 bp Feature: domain Description: Glyco_tranf_2_5 Location: 4082-4721 bp Feature: domain Description: Glyco_tranf_2_5 Location: 4082-4721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Laminin_G_3 (pfam13385), PKD (smart00089), CHU_C (pfam13585), Glyco_tranf_2_5 (pfam13712)