myRT

myRT report for GCA_903970525.1_BOG_genome_mining.99

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Seq: CAJCIZ010000002.1 Myxococcales bacterium isolate BOG_genome_mining.99 genome assembly, contig: k141_7533993, whole genome shotgun sequence (2965 bp)
Overview 1 RT 1: 3-2563 bp Neighborhood of RT #1 [3, 2563] RVT-GII GIIM IS285 Feature: gene Location: 3-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213-849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 3-849 bp Feature: domain Description: GIIM Note: maturase Location: 924-1101 bp Feature: domain Description: GIIM Note: maturase Location: 924-1 1 01 bp Feature: gene Location: 1297-1812 bp Feature: domain Description: IS285 Location: 1303-1795 bp Feature: domain Description: IS285 Location: 1 303-1 795 bp Feature: gene Location: 1973-2563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IS285 (COG3328)

Seq: CAJCIZ010000024.1 Myxococcales bacterium isolate BOG_genome_mining.99 genome assembly, contig: k141_4795629, whole genome shotgun sequence (33795 bp)
Overview 1 RT 1: 3-4751 bp Neighborhood of RT #1 [3, 4771] HTH_Tnp_1 RVT-UG18 Tra8 Feature: gene Location: 3-314 bp Feature: domain Description: HTH_Tnp_1 Location: 12-213 bp Feature: domain Description: HTH_Tnp_1 Location: 12 -2 13 bp Feature: gene Location: 666-1613 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 909-1485 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 909-1485 bp Feature: gene Location: 1848-3692 bp Feature: gene Location: 3800-4771 bp Feature: domain Description: Tra8 Location: 3809-4751 bp Feature: domain Description: Tra8 Location: 3809-4751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-UG18, Tra8 (COG2826)

Seq: CAJCIZ010000091.1 Myxococcales bacterium isolate BOG_genome_mining.99 genome assembly, contig: k141_4983313, whole genome shotgun sequence (10305 bp)
Overview 1 RT 1: 257-4278 bp 2 RT 2: 8694-10188 bp Neighborhood of RT #1 [257, 4286] INT_FimBE_like RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [8694, 10283] HTH_3 Gp49 RVT-UG18 Feature: gene Location: 257-694 bp Feature: domain Description: INT_FimBE_like Location: 260-680 bp Feature: domain Description: INT_FimBE_like Location: 260-680 bp Feature: gene Location: 878-1012 bp Feature: gene Location: 1476-2690 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1716-2415 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1716-2415 bp Feature: gene Location: 3020-3364 bp Feature: domain Description: Avd_like Location: 3047-3353 bp Feature: domain Description: Avd_like Location: 3 047-3 3 53 bp Feature: gene Location: 3414-4286 bp Feature: domain Description: DUF1566 Location: 3864-4278 bp Feature: domain Description: DUF1566 Location: 3 864-4278 bp Feature: gene Location: 8694-9008 bp Feature: domain Description: HTH_3 Location: 8808-8970 bp Feature: domain Description: HTH_3 Location: 8808-8970 bp Feature: gene Location: 9001-9336 bp Feature: domain Description: Gp49 Location: 9049-9316 bp Feature: domain Description: Gp49 Location: 9049-93 16 bp Feature: gene Location: 9498-10283 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 9753-10188 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 9753 -10188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_FimBE_like (cd01197), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), HTH_3 (pfam01381), Gp49 (pfam05973), RVT-UG18

Seq: CAJCIZ010000152.1 Myxococcales bacterium isolate BOG_genome_mining.99 genome assembly, contig: k141_7068457, whole genome shotgun sequence (8507 bp)
Overview 1 RT 1: 3435-7257 bp Neighborhood of RT #1 [3435, 7257] RVT_N RVT-GII GIIM Feature: gene Location: 3435-4529 bp Feature: gene Location: 4595-5101 bp Feature: gene Location: 5122-6651 bp Feature: domain Description: RVT_N Location: 5176-5419 bp Feature: domain Description: RVT_N Location: 5176-54 19 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5464-6091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 64 -6091 bp Feature: domain Description: GIIM Note: maturase Location: 6142-6376 bp Feature: domain Description: GIIM Note: maturase Location: 614 2-6376 bp Feature: gene Location: 6819-7019 bp Feature: gene Location: 7075-7257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CAJCIZ010000220.1 Myxococcales bacterium isolate BOG_genome_mining.99 genome assembly, contig: k141_11038247, whole genome shotgun sequence (23938 bp)
Overview 1 RT 1: 20858-23737 bp Neighborhood of RT #1 [20858, 23844] RVT-UG18 Feature: gene Location: 20858-21508 bp Feature: gene Location: 21670-23175 bp Feature: gene Location: 23428-23844 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 23593-23737 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 235 93-23737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18

Seq: CAJCIZ010000235.1 Myxococcales bacterium isolate BOG_genome_mining.99 genome assembly, contig: k141_12064891, whole genome shotgun sequence (7698 bp)
Overview 1 RT 1: 3323-7672 bp Neighborhood of RT #1 [3323, 7695] TniB RVT-UG18 INT_Cre_C Feature: gene Location: 3323-4273 bp Feature: domain Description: TniB Location: 3395-4007 bp Feature: domain Description: TniB Location: 3395-4007 bp Feature: gene Location: 4379-5833 bp Feature: gene Location: 6097-7032 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 6343-6925 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 6 343-6 925 bp Feature: gene Location: 7069-7695 bp Feature: domain Description: INT_Cre_C Location: 7114-7672 bp Feature: domain Description: INT_Cre_C Location: 7114-76 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TniB (pfam05621), RVT-UG18, INT_Cre_C (cd00799)