myRT

myRT report for GCA_903970885.1_ASM90397088v1

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Seq: CAJCKM010000001.1 Bacillus sp. ME75 genome assembly, contig: NODE_1_length_492177_cov_10.101536_pilon, whole genome shotgun sequence (492177 bp)
Overview 1 RT 1: 108901-113433 bp Neighborhood of RT #1 [108901, 113447] TrHb2_Bs-trHb-like_O LT_GEWL_like RVT-GII Intron_maturas2 HNHc MltE YjbK Feature: gene Location: 108901-109311 bp Feature: domain Description: TrHb2_Bs-trHb-like_O Location: 108928-109273 bp Feature: domain Description: TrHb2_Bs-trHb-like_O Location: 1 08928-1 09273 bp Feature: gene Location: 109598-109831 bp Feature: domain Description: LT_GEWL_like Location: 109601-109823 bp Feature: domain Description: LT_GEWL_like Location: 1 09601 -1 09823 bp Feature: gene Location: 109938-111761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110202-111033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0202-1 1 1 033 bp Feature: domain Description: Intron_maturas2 Location: 111180-111444 bp Feature: domain Description: Intron_maturas2 Location: 1 1 1 1 80-1 1 1 444 bp Feature: domain Description: HNHc Note: nucleases Location: 111558-111735 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 1 558-1 1 1 735 bp Feature: gene Location: 112379-112843 bp Feature: domain Description: MltE Location: 112643-112841 bp Feature: domain Description: MltE Location: 1 1 2643-1 1 2841 bp Feature: gene Location: 112848-113447 bp Feature: domain Description: YjbK Location: 112863-113433 bp Feature: domain Description: YjbK Location: 1 1 2863-1 1 3433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrHb2_Bs-trHb-like_O (cd14772), LT_GEWL_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MltE (COG0741), YjbK (COG4116)

Seq: CAJCKM010000006.1 Bacillus sp. ME75 genome assembly, contig: NODE_6_length_235149_cov_9.157580_pilon, whole genome shotgun sequence (235149 bp)
Overview 1 RT 1: 81645-88400 bp Neighborhood of RT #1 [81645, 88408] RNase_HI_like RVT-UG15 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like Peptidase_M29 Feature: gene Location: 81645-82340 bp Feature: domain Description: RNase_HI_like Location: 81654-81999 bp Feature: domain Description: RNase_HI_like Location: 81654-81999 bp Feature: gene Location: 83101-83274 bp Feature: gene Location: 83473-84975 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 83908-84301 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 83908-84301 bp Feature: gene Location: 85991-87115 bp Feature: domain Description: Arm-DNA-bind_4 Location: 86030-86159 bp Feature: domain Description: Arm-DNA-bind_4 Location: 86030-86159 bp Feature: domain Description: Phage_int_SAM_3 Location: 86198-86357 bp Feature: domain Description: Phage_int_SAM_3 Location: 86198-86357 bp Feature: domain Description: INT_ICEBs1_C_like Location: 86525-87053 bp Feature: domain Description: INT_ICEBs1_C_like Location: 8652 5-87053 bp Feature: gene Location: 87176-88408 bp Feature: domain Description: Peptidase_M29 Location: 87191-88400 bp Feature: domain Description: Peptidase_M2 9 Location: 87191-88400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_like (cd09279), RVT-UG15, Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), Peptidase_M29 (pfam02073)

Seq: CAJCKM010000007.1 Bacillus sp. ME75 genome assembly, contig: NODE_7_length_209079_cov_9.854753_pilon, whole genome shotgun sequence (209079 bp)
Overview 1 RT 1: 130368-137443 bp Neighborhood of RT #1 [130368, 137448] OpuBA PotB PBP2_ChoS PBP2_ChoS RVT-GII HNHc YwaF MdaB Feature: gene Location: 130368-131318 bp Feature: domain Description: OpuBA Location: 130371-131277 bp Feature: domain Description: OpuBA Location: 13 03 71-13 1277 bp Feature: gene Location: 131318-132841 bp Feature: domain Description: PotB Location: 131360-131495 bp Feature: domain Description: PotB Location: 13 13 60-13 1495 bp Feature: domain Description: PBP2_ChoS Location: 131522-131897 bp Feature: domain Description: PBP2_ChoS Location: 13 1522-13 1897 bp Feature: domain Description: PBP2_ChoS Location: 132032-132815 bp Feature: domain Description: PBP2_ChoS Location: 13 203 2-13 2815 bp Feature: gene Location: 133933-135894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134257-134992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 4257-13 4992 bp Feature: domain Description: HNHc Note: nucleases Location: 135580-135745 bp Feature: domain Description: HNHc Note: nucleases Location: 13 5580-13 5745 bp Feature: gene Location: 136013-136789 bp Feature: domain Description: YwaF Location: 136079-136748 bp Feature: domain Description: YwaF Location: 13 6079-13 6748 bp Feature: gene Location: 136930-137448 bp Feature: domain Description: MdaB Location: 136933-137443 bp Feature: domain Description: MdaB Location: 13 693 3 -13 7443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OpuBA (COG1125), PotB (COG1176), PBP2_ChoS (cd13610), RVT-GII, HNHc (smart00507), YwaF (COG5522), MdaB (COG2249)

Seq: CAJCKM010000012.1 Bacillus sp. ME75 genome assembly, contig: NODE_12_length_157026_cov_9.623737_pilon, whole genome shotgun sequence (157026 bp)
Overview 1 RT 1: 65253-71360 bp Neighborhood of RT #1 [65253, 71440] LdcA SH3_16 Spr RVT-GII Intron_maturas2 HNHc AppF Beta-lactamase2 Feature: gene Location: 65253-66197 bp Feature: domain Description: LdcA Location: 65256-66144 bp Feature: domain Description: LdcA Location: 65256-6614 4 bp Feature: gene Location: 66229-67032 bp Feature: domain Description: SH3_16 Location: 66403-66535 bp Feature: domain Description: SH3_16 Location: 664 03-66535 bp Feature: domain Description: Spr Location: 66760-67024 bp Feature: domain Description: Spr Location: 66760-67024 bp Feature: gene Location: 67613-69421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67877-68702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67877-68702 bp Feature: domain Description: Intron_maturas2 Location: 68780-69251 bp Feature: domain Description: Intron_maturas2 Location: 68780-69251 bp Feature: domain Description: HNHc Note: nucleases Location: 69251-69395 bp Feature: domain Description: HNHc Note: nucleases Location: 69251-69395 bp Feature: gene Location: 69657-70664 bp Feature: domain Description: AppF Location: 69669-70587 bp Feature: domain Description: AppF Location: 69669-70587 bp Feature: gene Location: 70664-71440 bp Feature: domain Description: Beta-lactamase2 Location: 70754-71360 bp Feature: domain Description: Beta-lactamase2 Location: 70754 -71360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LdcA (COG1619), SH3_16 (pfam18348), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AppF (COG4608), Beta-lactamase2 (pfam13354)

Seq: CAJCKM010000037.1 Bacillus sp. ME75 genome assembly, contig: NODE_37_length_31059_cov_11.557122_pilon, whole genome shotgun sequence (31059 bp)
Overview 1 RT 1: 134-4026 bp Neighborhood of RT #1 [134, 4043] RVT_N RVT-GII GIIM HNHc HTH_XRE CitB Feature: gene Location: 134-1933 bp Feature: domain Description: RVT_N Location: 194-434 bp Feature: domain Description: RVT_N Location: 194-434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 03-1160 bp Feature: domain Description: GIIM Note: maturase Location: 1241-1469 bp Feature: domain Description: GIIM Note: maturase Location: 1241-1469 bp Feature: domain Description: HNHc Note: nucleases Location: 1673-1832 bp Feature: domain Description: HNHc Note: nucleases Location: 1673-1832 bp Feature: gene Location: 2839-3258 bp Feature: domain Description: HTH_XRE Location: 2872-3040 bp Feature: domain Description: HTH_XRE Location: 2872-3040 bp Feature: gene Location: 3414-4043 bp Feature: domain Description: CitB Location: 3429-4026 bp Feature: domain Description: CitB Location: 3429-4026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HTH_XRE (smart00530), CitB (TIGR02484)

Seq: CAJCKM010000050.1 Bacillus sp. ME75 genome assembly, contig: NODE_50_length_17955_cov_11.139540_pilon, whole genome shotgun sequence (17955 bp)
Overview 1 RT 1: 246-5713 bp 2 RT 2: 9726-15572 bp Neighborhood of RT #1 [246, 5814] Spr RVT-GII Intron_maturas2 HNHc Lysozyme_like VirB4 TraC-F-type TraC-F-type Neighborhood of RT #2 [9726, 15572] TraG-D_C RVT-GII Intron_maturas2 HNHc TraG_VirD4 TraG_VirD4 Feature: gene Location: 246-719 bp Feature: domain Description: Spr Location: 321-702 bp Feature: domain Description: Spr Location: 321-702 bp Feature: gene Location: 845-2668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109-1943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109-1943 bp Feature: domain Description: Intron_maturas2 Location: 2015-2333 bp Feature: domain Description: Intron_maturas2 Location: 2015-2333 bp Feature: domain Description: HNHc Note: nucleases Location: 2489-2645 bp Feature: domain Description: HNHc Note: nucleases Location: 2489-26 45 bp Feature: gene Location: 3241-3876 bp Feature: domain Description: Lysozyme_like Location: 3436-3865 bp Feature: domain Description: Lysozyme_like Location: 3436 -386 5 bp Feature: gene Location: 3880-5814 bp Feature: domain Description: VirB4 Location: 3997-4378 bp Feature: domain Description: VirB4 Location: 3997-4378 bp Feature: domain Description: TraC-F-type Location: 4591-4948 bp Feature: domain Description: TraC-F-type Location: 4591-4948 bp Feature: domain Description: TraC-F-type Location: 5392-5713 bp Feature: domain Description: TraC-F-type Location: 5392-5713 bp Feature: gene Location: 9726-9932 bp Feature: gene Location: 9954-10838 bp Feature: domain Description: TraG-D_C Location: 9963-10275 bp Feature: domain Description: TraG-D_C Location: 996 3-10275 bp Feature: gene Location: 10946-12760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11210-12038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11210-12038 bp Feature: domain Description: Intron_maturas2 Location: 12116-12410 bp Feature: domain Description: Intron_maturas2 Location: 12116 -12410 bp Feature: domain Description: HNHc Note: nucleases Location: 12557-12731 bp Feature: domain Description: HNHc Note: nucleases Location: 12557-12731 bp Feature: gene Location: 13310-15073 bp Feature: domain Description: TraG_VirD4 Location: 13865-14549 bp Feature: domain Description: TraG_VirD4 Location: 1386 5-14549 bp Feature: domain Description: TraG_VirD4 Location: 14852-15014 bp Feature: domain Description: TraG_VirD4 Location: 14852-15014 bp Feature: gene Location: 15063-15572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), VirB4 (COG3451), TraC-F-type (TIGR02746), TraG-D_C (pfam12696), TraG_VirD4

Seq: CAJCKM010000063.1 Bacillus sp. ME75 genome assembly, contig: NODE_63_length_11018_cov_12.427981_pilon, whole genome shotgun sequence (11018 bp)
Overview 1 RT 1: 3414-8599 bp Neighborhood of RT #1 [3414, 8715] RVT_N RVT-GII GIIM HNHc DUF1738 xerC Feature: gene Location: 3414-3893 bp Feature: gene Location: 3944-4219 bp Feature: gene Location: 4967-6766 bp Feature: domain Description: RVT_N Location: 5027-5267 bp Feature: domain Description: RVT_N Location: 5027 -5267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5324-5993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5324-5993 bp Feature: domain Description: GIIM Note: maturase Location: 6074-6302 bp Feature: domain Description: GIIM Note: maturase Location: 607 4-6302 bp Feature: domain Description: HNHc Note: nucleases Location: 6506-6665 bp Feature: domain Description: HNHc Note: nucleases Location: 6506-6665 bp Feature: gene Location: 6875-7597 bp Feature: domain Description: DUF1738 Location: 7067-7253 bp Feature: domain Description: DUF17 38 Location: 7 067 -7 253 bp Feature: gene Location: 7666-8715 bp Feature: domain Description: xerC Location: 7693-8599 bp Feature: domain Description: xerC Location: 7 693-8599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1738 (pfam08401), xerC (PRK01287)

Seq: CAJCKM010000067.1 Bacillus sp. ME75 genome assembly, contig: NODE_67_length_10199_cov_10.132619_pilon, whole genome shotgun sequence (10199 bp)
Overview 1 RT 1: 2855-7804 bp Neighborhood of RT #1 [2855, 7887] PRK09182 PRK09182 COG1787 zf-C4_Topoisom RVT-GII Intron_maturas2 HNHc DUF3991 Toprim_2 Feature: gene Location: 2855-3682 bp Feature: domain Description: PRK09182 Location: 3320-3464 bp Feature: domain Description: PRK0918 2 Location: 3320-3464 bp Feature: domain Description: PRK09182 Location: 3515-3638 bp Feature: domain Description: PRK0918 2 Location: 3515-3638 bp Feature: gene Location: 3723-4145 bp Feature: domain Description: COG1787 Location: 3729-3951 bp Feature: domain Description: COG178 7 Location: 3729-3951 bp Feature: domain Description: zf-C4_Topoisom Location: 4008-4116 bp Feature: domain Description: zf-C4_Topoisom Location: 4008 -4116 bp Feature: gene Location: 4324-6138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4588-5422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458 8 -5422 bp Feature: domain Description: Intron_maturas2 Location: 5500-5836 bp Feature: domain Description: Intron_maturas2 Location: 5500-58 36 bp Feature: domain Description: HNHc Note: nucleases Location: 5929-6112 bp Feature: domain Description: HNHc Note: nucleases Location: 5929-6112 bp Feature: gene Location: 6726-6905 bp Feature: gene Location: 6898-7887 bp Feature: domain Description: DUF3991 Location: 7273-7462 bp Feature: domain Description: DUF3991 Location: 7273-7462 bp Feature: domain Description: Toprim_2 Location: 7528-7804 bp Feature: domain Description: Toprim_2 Location: 7528 -78 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09182 (DNA polymerase III subunit epsilon; Validated), COG1787 (Endonuclease, HJR/Mrr/RecB family ), zf-C4_Topoisom (pfam01396), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3991 (pfam13154), Toprim_2 (pfam13155)

Seq: CAJCKM010000068.1 Bacillus sp. ME75 genome assembly, contig: NODE_68_length_9643_cov_9.877390_pilon, whole genome shotgun sequence (9643 bp)
Overview 1 RT 1: 3071-8992 bp Neighborhood of RT #1 [3071, 9642] PRK06769 Acetyltransf_1 RVT-GII GIIM RVT-GII HNHc PRK09183 COG4584 Feature: gene Location: 3071-3568 bp Feature: domain Description: PRK06769 Location: 3092-3560 bp Feature: domain Description: PRK06769 Location: 309 2-3560 bp Feature: gene Location: 3748-4182 bp Feature: domain Description: Acetyltransf_1 Location: 3817-4120 bp Feature: domain Description: Acetyltransf_1 Location: 3817-4120 bp Feature: gene Location: 4420-5409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4426-4768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4426-4768 bp Feature: domain Description: GIIM Note: maturase Location: 4834-5068 bp Feature: domain Description: GIIM Note: maturase Location: 4834-5068 bp Feature: gene Location: 5589-7610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6072-6774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6072-6774 bp Feature: domain Description: HNHc Note: nucleases Location: 7332-7470 bp Feature: domain Description: HNHc Note: nucleases Location: 7332-7470 bp Feature: gene Location: 7763-8506 bp Feature: domain Description: PRK09183 Location: 7775-8477 bp Feature: domain Description: PRK09 183 Location: 7775-8477 bp Feature: gene Location: 8503-9642 bp Feature: domain Description: COG4584 Location: 8509-8992 bp Feature: domain Description: COG4584 Location: 8509 -89 9 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06769 (HAD-IIIA family hydrolase), Acetyltransf_1 (pfam00583), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: CAJCKM010000070.1 Bacillus sp. ME75 genome assembly, contig: NODE_70_length_8942_cov_7.408529_pilon, whole genome shotgun sequence (8942 bp)
Overview 1 RT 1: 1-4955 bp Neighborhood of RT #1 [1, 5455] Beta-lactamase DUF3471 RVT_N RVT-GII GIIM Polbeta Feature: gene Location: 1-1218 bp Feature: domain Description: Beta-lactamase Location: 4-763 bp Feature: domain Description: Beta-lactamase Location: 4-763 bp Feature: domain Description: DUF3471 Location: 904-1177 bp Feature: domain Description: DUF3471 Location: 904-1177 bp Feature: gene Location: 1484-3193 bp Feature: domain Description: RVT_N Location: 1592-1838 bp Feature: domain Description: RVT_N Location: 1592-1838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1892-2552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1892-2552 bp Feature: domain Description: GIIM Note: maturase Location: 2618-2852 bp Feature: domain Description: GIIM Note: maturase Location: 2618-2852 bp Feature: gene Location: 3824-4081 bp Feature: gene Location: 4667-5455 bp Feature: domain Description: Polbeta Location: 4733-4955 bp Feature: domain Description: Polbeta Location: 4733-4955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta-lactamase (pfam00144), DUF3471 (pfam11954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Polbeta (pfam18765)

Seq: CAJCKM010000097.1 Bacillus sp. ME75 genome assembly, contig: NODE_97_length_4544_cov_10.872596_pilon, whole genome shotgun sequence (4544 bp)
Overview 1 RT 1: 1192-4199 bp Neighborhood of RT #1 [1192, 4540] RVT_N RVT-GII GIIM Feature: gene Location: 1192-1515 bp Feature: gene Location: 1747-2220 bp Feature: gene Location: 2855-4540 bp Feature: domain Description: RVT_N Location: 2939-3185 bp Feature: domain Description: RVT_N Location: 2939-3185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3239-3899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3239-3899 bp Feature: domain Description: GIIM Note: maturase Location: 3965-4199 bp Feature: domain Description: GIIM Note: maturase Location: 3965-4199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)