myRT

myRT report for GCA_903970925.1_ASM90397092v1

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Seq: CAJCKE010000020.1 Serratia sp. ME47 genome assembly, contig: NODE_20_length_91549_cov_7.139198_pilon, whole genome shotgun sequence (91549 bp)
Overview 1 RT 1: 41656-45524 bp 2 RT 2: 47844-50899 bp Neighborhood of RT #1 [41656, 45529] HTH_21 RVT-GII HTH_29 InsE PHA02517 GIIM Neighborhood of RT #2 [47844, 50916] RVT-GII RVT-GII PinE rve Feature: gene Location: 41656-41877 bp Feature: domain Description: HTH_21 Location: 41740-41848 bp Feature: domain Description: HTH_21 Location: 41 740-41 848 bp Feature: gene Location: 42309-42518 bp Feature: gene Location: 42658-43785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42931-43642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42931 -43642 bp Feature: gene Location: 43917-45158 bp Feature: domain Description: HTH_29 Location: 43923-44019 bp Feature: domain Description: HTH_29 Location: 43923-4401 9 bp Feature: domain Description: InsE Location: 44202-44469 bp Feature: domain Description: InsE Location: 44202-44469 bp Feature: domain Description: PHA02517 Location: 44589-45135 bp Feature: domain Description: PHA0251 7 Location: 44589-451 35 bp Feature: gene Location: 45365-45529 bp Feature: domain Description: GIIM Note: maturase Location: 45401-45524 bp Feature: domain Description: GIIM Note: maturase Location: 45401 -45524 bp Feature: gene Location: 47844-48032 bp Feature: gene Location: 48052-48198 bp Feature: gene Location: 48261-48635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48267-48492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48267-48492 bp Feature: gene Location: 48558-48767 bp Feature: gene Location: 48884-49252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49076-49247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49076-49247 bp Feature: gene Location: 49830-50429 bp Feature: domain Description: PinE Location: 49833-50385 bp Feature: domain Description: PinE Location: 49833-50385 bp Feature: gene Location: 50545-50916 bp Feature: domain Description: rve Location: 50563-50899 bp Feature: domain Description: rve Location: 50563-50899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, HTH_29 (pfam13551), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), PinE (COG1961), rve (pfam00665)

Seq: CAJCKE010000024.1 Serratia sp. ME47 genome assembly, contig: NODE_24_length_78555_cov_4.103060_pilon, whole genome shotgun sequence (78555 bp)
Overview 1 RT 1: 26985-30816 bp Neighborhood of RT #1 [26985, 30827] RVT-Retrons PiuB DUF2534 Feature: gene Location: 26985-27134 bp Feature: gene Location: 27288-27515 bp Feature: gene Location: 27546-28505 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27723-28248 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 772 3-2 82 48 bp Feature: gene Location: 28717-29064 bp Feature: gene Location: 29166-30827 bp Feature: domain Description: PiuB Location: 29214-30528 bp Feature: domain Description: PiuB Location: 2 92 14-3052 8 bp Feature: domain Description: DUF2534 Location: 30588-30816 bp Feature: domain Description: DUF2 534 Location: 30588-30816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PiuB (COG3182), DUF2534 (pfam10749)