myRT

myRT report for GCA_903992695.1_Q1129

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Seq: CAJEUN010000043.1 Mycobacterium tuberculosis variant bovis strain CSURQ1129 genome assembly, contig: contig00043, whole genome shotgun sequence (48309 bp)
Overview 1 RT 1: 21239-26295 bp Neighborhood of RT #1 [21239, 26315] LolD CAP_ED LolE SalY RVT-GII PRK13034 Feature: gene Location: 21239-22231 bp Feature: domain Description: LolD Location: 21254-21887 bp Feature: domain Description: LolD Location: 21 254-21 887 bp Feature: domain Description: CAP_ED Location: 21920-22178 bp Feature: domain Description: CAP_ED Location: 21 920-221 78 bp Feature: gene Location: 22234-23283 bp Feature: domain Description: LolE Location: 22240-22573 bp Feature: domain Description: LolE Location: 22240-22573 bp Feature: domain Description: SalY Location: 22855-23272 bp Feature: domain Description: SalY Location: 22855-23272 bp Feature: gene Location: 23714-24448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23954-24266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23954-24266 bp Feature: gene Location: 24814-24963 bp Feature: gene Location: 25038-26315 bp Feature: domain Description: PRK13034 Location: 25050-26295 bp Feature: domain Description: PRK1 3034 Location: 25050-26295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), CAP_ED (cl00047), LolE (COG4591), SalY (COG0577), RVT-GII, PRK13034 (serine hydroxymethyltransferase; Reviewed)

Seq: CAJEUN010000091.1 Mycobacterium tuberculosis variant bovis strain CSURQ1129 genome assembly, contig: contig00091, whole genome shotgun sequence (5841 bp)
Overview 1 RT 1: 169-4929 bp Neighborhood of RT #1 [169, 4940] RVT-UNC L1-EN Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 169-1626 bp Feature: gene Location: 1658-2980 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2252-2897 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 2 52 -2 897 bp Feature: gene Location: 3303-3962 bp Feature: domain Description: L1-EN Location: 3330-3954 bp Feature: domain Description: L1-EN Location: 3330-3954 bp Feature: gene Location: 4014-4940 bp Feature: domain Description: Tnp_22_trimer Location: 4308-4431 bp Feature: domain Description: Tnp_2 2 _trimer Location: 4308-4431 bp Feature: domain Description: Transposase_22 Location: 4443-4731 bp Feature: domain Description: Transposase_2 2 Location: 4443-4731 bp Feature: domain Description: Tnp_22_dsRBD Location: 4743-4929 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 4743-492 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG11(RVT-UNC), L1-EN (cd09076), Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)

Seq: CAJEUN010000094.1 Mycobacterium tuberculosis variant bovis strain CSURQ1129 genome assembly, contig: contig00094, whole genome shotgun sequence (4137 bp)
Overview 1 RT 1: 306-3920 bp Neighborhood of RT #1 [306, 3979] RVT-UNC L1-EN Transposase_22 Tnp_22_dsRBD Feature: gene Location: 306-632 bp Feature: gene Location: 801-2069 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1101-1758 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1101-1758 bp Feature: gene Location: 2381-3355 bp Feature: domain Description: L1-EN Location: 2411-3089 bp Feature: domain Description: L1-EN Location: 2411-3 089 bp Feature: gene Location: 3419-3979 bp Feature: domain Description: Transposase_22 Location: 3428-3719 bp Feature: domain Description: Transposase_22 Location: 3 428-3 719 bp Feature: domain Description: Tnp_22_dsRBD Location: 3728-3920 bp Feature: domain Description: Tnp_22_dsRBD Location: 3 728-3 920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), L1-EN (cd09076), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)

Seq: CAJEUN010000097.1 Mycobacterium tuberculosis variant bovis strain CSURQ1129 genome assembly, contig: contig00097, whole genome shotgun sequence (3197 bp)
Overview 1 RT 1: 155-2411 bp Neighborhood of RT #1 [155, 3046] L1-EN RVT-UNC Feature: gene Location: 155-3046 bp Feature: domain Description: L1-EN Location: 242-956 bp Feature: domain Description: L1-EN Location: 24 2-956 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1772-2411 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1772-24 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG27/RVT-CRISPR/RVT-GII(RVT-UNC)