myRT

myRT report for GCA_904374455.1_Chicken_12_mag_162

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Seq: CAJFEJ010000052.1 (9990 bp)
Overview 1 RT 1: 5553-8477 bp Neighborhood of RT #1 [5553, 8488] MutS_I Avd_like RVT-DGRs TIGR00730 Feature: gene Location: 5553-5954 bp Feature: domain Description: MutS_I Location: 5568-5775 bp Feature: domain Description: MutS_I Location: 5568-5775 bp Feature: gene Location: 5944-6297 bp Feature: domain Description: Avd_like Location: 5986-6283 bp Feature: domain Description: Avd_like Location: 5986-6283 bp Feature: gene Location: 6506-7396 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6515-7211 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 651 5-721 1 bp Feature: gene Location: 7487-7738 bp Feature: gene Location: 7943-8488 bp Feature: domain Description: TIGR00730 Location: 7988-8477 bp Feature: domain Description: TIGR00730 Location: 7988-8477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, TIGR00730 (TIGR00730 family protein)

Seq: CAJFEJ010000029.1 (22034 bp)
Overview 1 RT 1: 15636-22032 bp Neighborhood of RT #1 [15636, 22032] FtsW GdpP RVT-GII Tra8 RVT-GII GIIM Feature: gene Location: 15636-16796 bp Feature: domain Description: FtsW Location: 15651-16761 bp Feature: domain Description: FtsW Location: 15651-16761 bp Feature: gene Location: 17126-18499 bp Feature: domain Description: GdpP Location: 17267-18266 bp Feature: domain Description: GdpP Location: 172 67-182 66 bp Feature: gene Location: 18966-19688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19203-19653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 03-19653 bp Feature: gene Location: 19689-20825 bp Feature: domain Description: Tra8 Location: 19728-20772 bp Feature: domain Description: Tra8 Location: 1972 8-2 0772 bp Feature: gene Location: 20929-21555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20935-21100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0935-2 1100 bp Feature: domain Description: GIIM Note: maturase Location: 21157-21358 bp Feature: domain Description: GIIM Note: maturase Location: 2 1157-2 1358 bp Feature: gene Location: 21862-22032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsW (COG0772), GdpP (COG3887), RVT-GII, Tra8 (COG2826), GIIM (pfam08388)

Seq: CAJFEJ010000067.1 (7706 bp)
Overview 1 RT 1: 101-2861 bp Neighborhood of RT #1 [101, 3976] RVT-UG2 PinE Feature: gene Location: 101-1450 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 305-1145 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3 05-1145 bp Feature: gene Location: 1729-1950 bp Feature: gene Location: 2222-3976 bp Feature: domain Description: PinE Location: 2249-2861 bp Feature: domain Description: PinE Location: 2249-2861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, PinE (COG1961)