myRT

myRT report for GCA_904809545.1_25964_1_264

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Seq: CAJGEP010000054.1 Escherichia coli strain GU799 genome assembly, contig: ERS2428388SCcontig000054, whole genome shotgun sequence (11617 bp)
Overview 1 RT 1: 287-11207 bp Neighborhood of RT #1 [287, 11212] bcsA PRK11114 RVT-GII GIIM PRK11447 Feature: gene Location: 287-2392 bp Feature: domain Description: bcsA Location: 329-2378 bp Feature: domain Description: bcsA Location: 329-2378 bp Feature: gene Location: 2456-4606 bp Feature: domain Description: PRK11114 Location: 2516-4589 bp Feature: domain Description: PRK1 1 1 1 4 Location: 251 6-4589 bp Feature: gene Location: 5353-6699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5641-6259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5641 -6259 bp Feature: domain Description: GIIM Note: maturase Location: 6307-6538 bp Feature: domain Description: GIIM Note: maturase Location: 6307-6538 bp Feature: gene Location: 7739-11212 bp Feature: domain Description: PRK11447 Location: 7742-11207 bp Feature: domain Description: PRK1 1 447 Location: 7742-1 1 207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK11447 (cellulose synthase subunit BcsC; Provisional)

Seq: CAJGEP010000013.1 Escherichia coli strain GU799 genome assembly, contig: ERS2428388SCcontig000013, whole genome shotgun sequence (109876 bp)
Overview 1 RT 1: 70598-75428 bp Neighborhood of RT #1 [70598, 75442] PBP2_CrgA_like_5 RVT-Retrons COG3680 PinE Feature: gene Location: 70598-71008 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 70670-70982 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 70670-70982 bp Feature: gene Location: 71270-71398 bp Feature: gene Location: 71510-73345 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71645-72341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71645-72 341 bp Feature: gene Location: 74057-74830 bp Feature: domain Description: COG3680 Location: 74060-74828 bp Feature: domain Description: COG3680 Location: 74060-7482 8 bp Feature: gene Location: 74888-75442 bp Feature: domain Description: PinE Location: 74891-75428 bp Feature: domain Description: PinE Location: 74891-7542 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_CrgA_like_5 (cd08474), RVT-Retrons, COG3680 (Uncharacterized protein ), PinE (COG1961)