myRT

myRT report for GCA_904809585.1_25964_1_103

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Seq: CAJGEL010000024.1 Escherichia coli strain GU732 genome assembly, contig: ERS2428226SCcontig000024, whole genome shotgun sequence (55024 bp)
Overview 1 RT 1: 15147-20441 bp Neighborhood of RT #1 [15147, 20497] AdoMet_MTases RVT-GII GIIM HNHc PRK13706 Abhydrolase_1 Feature: gene Location: 15147-15710 bp Ori: CAD5550715.1 Feature: domain Description: AdoMet_MTases Location: 15309-15606 bp Feature: domain Description: AdoMet_MTases Location: 1 5309-1 5606 bp Feature: gene Location: 15710-15931 bp Feature: gene Location: 16046-17320 bp Ori: CAD5550750.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16049-16631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6049-1 6631 bp Feature: domain Description: GIIM Note: maturase Location: 16682-16916 bp Feature: domain Description: GIIM Note: maturase Location: 1 6682-1 691 6 bp Feature: domain Description: HNHc Note: nucleases Location: 17126-17285 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 26-1 7285 bp Feature: gene Location: 18961-19578 bp Ori: CAD5550767.1 Gene: traX Feature: domain Description: PRK13706 Location: 18964-19576 bp Feature: domain Description: PRK1 3706 Location: 1 8964-1 9576 bp Feature: gene Location: 19637-20497 bp Ori: CAD5550784.1 Feature: domain Description: Abhydrolase_1 Location: 19715-20441 bp Feature: domain Description: Abhydrolase_1 Location: 1 971 5-20441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdoMet_MTases (cl17173), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13706 (conjugal transfer pilus acetylase TraX), Abhydrolase_1 (pfam00561)

Seq: CAJGEL010000023.1 Escherichia coli strain GU732 genome assembly, contig: ERS2428226SCcontig000023, whole genome shotgun sequence (71766 bp)
Overview 1 RT 1: 44852-48021 bp Neighborhood of RT #1 [44852, 48023] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 44852-45070 bp Ori: CAD5549785.1 Feature: domain Description: PRK09678 Location: 44855-45053 bp Feature: domain Description: PRK09678 Location: 44855-45053 bp Feature: gene Location: 45332-45505 bp Feature: gene Location: 45474-46247 bp Ori: CAD5549825.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45609-46062 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45609-46062 bp Feature: gene Location: 46933-47415 bp Ori: CAD5549845.1 Gene: smpB Feature: domain Description: SmpB Location: 46963-47410 bp Feature: domain Description: SmpB Location: 46963-47410 bp Feature: gene Location: 47547-48023 bp Ori: CAD5549866.1 Gene: yfjG Feature: domain Description: PRK10724 Location: 47553-48021 bp Feature: domain Description: PRK1072 4 Location: 47553-4802 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)