myRT

myRT report for GCA_904809625.1_25964_1_176

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Seq: CAJGEJ010000041.1 Escherichia coli strain GU679 genome assembly, contig: ERS2428299SCcontig000041, whole genome shotgun sequence (2859 bp)
Overview 1 RT 1: 93-2382 bp Neighborhood of RT #1 [93, 2447] RVT-GII GIIM PHA02517 Feature: gene Location: 93-1616 bp Ori: CAD5556651.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 2208-2447 bp Ori: CAD5556671.1 Feature: domain Description: PHA02517 Location: 2211-2382 bp Feature: domain Description: PHA0251 7 Location: 221 1 -2382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CAJGEJ010000024.1 Escherichia coli strain GU679 genome assembly, contig: ERS2428299SCcontig000024, whole genome shotgun sequence (55012 bp)
Overview 1 RT 1: 688-3294 bp Neighborhood of RT #1 [688, 3299] group_II_RT_mat RVT-GII PinE Feature: gene Location: 688-1080 bp Ori: CAD5549942.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 844-1027 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 844-102 7 bp Feature: gene Location: 1080-1667 bp Ori: CAD5549962.1 Gene: ltrA_1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086-162 6 bp Feature: gene Location: 2241-2642 bp Feature: gene Location: 2742-3299 bp Ori: CAD5549999.1 Gene: tnpR_1 Feature: domain Description: PinE Location: 2745-3294 bp Feature: domain Description: PinE Location: 2 745-32 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, PinE (COG1961)